RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 KIRREL2Q6UWL6 708 aa22.7■■□□□ 1.22
DNMT3A-206ENST00000406659 LINC00299Q6ZSB3 139 aa22.7■■□□□ 1.22
DNMT3A-206ENST00000406659 SLITRK4Q8IW52 837 aa22.7■■□□□ 1.22
DNMT3A-206ENST00000406659 SLC15A4Q8N697 577 aa22.7■■□□□ 1.22
DNMT3A-206ENST00000406659 DAZLQ92904 295 aaKnown RBP22.7■■□□□ 1.22
DNMT3A-206ENST00000406659 LCORQ96JN0 433 aaPredicted RBP22.7■■□□□ 1.22
DNMT3A-206ENST00000406659 TAPBPLQ9BX59 468 aa22.7■■□□□ 1.22
DNMT3A-206ENST00000406659 MKL2Q9ULH7 1088 aa22.7■■□□□ 1.22
DNMT3A-206ENST00000406659 LY6G6EA0A0G2JKS1 128 aa22.69■■□□□ 1.22
DNMT3A-206ENST00000406659 FRG2CA6NGY1 282 aa22.69■■□□□ 1.22
DNMT3A-206ENST00000406659 HCN1O60741 890 aa22.69■■□□□ 1.22
DNMT3A-206ENST00000406659 APOL3O95236 402 aa22.69■■□□□ 1.22
DNMT3A-206ENST00000406659 SLC2A10O95528 541 aa22.69■■□□□ 1.22
DNMT3A-206ENST00000406659 IGKV3-11P04433 115 aa22.69■■□□□ 1.22
DNMT3A-206ENST00000406659 TBXA2RP21731 343 aa22.69■■□□□ 1.22
DNMT3A-206ENST00000406659 OPRL1P41146 370 aa22.69■■□□□ 1.22
DNMT3A-206ENST00000406659 FXYD6P3P58550 94 aa22.69■■□□□ 1.22
DNMT3A-206ENST00000406659 COPZ1P61923 177 aa22.69■■□□□ 1.22
DNMT3A-206ENST00000406659 ACY1Q03154 408 aa22.69■■□□□ 1.22
DNMT3A-206ENST00000406659 SSX1Q16384 188 aa22.69■■□□□ 1.22
DNMT3A-206ENST00000406659 OR14A16Q8NHC5 309 aa22.69■■□□□ 1.22
DNMT3A-206ENST00000406659 OIT3Q8WWZ8 545 aa22.69■■□□□ 1.22
DNMT3A-206ENST00000406659 SH3YL1Q96HL8 342 aaPredicted RBP22.69■■□□□ 1.22
DNMT3A-206ENST00000406659 ZNF426Q9BUY5 554 aa22.69■■□□□ 1.22
DNMT3A-206ENST00000406659 SIGLEC7Q9Y286 467 aa22.69■■□□□ 1.22
DNMT3A-206ENST00000406659 EXOSC1Q9Y3B2 195 aaKnown RBP22.69■■□□□ 1.22
DNMT3A-206ENST00000406659 U3KQA8 63 aa22.69■■□□□ 1.22
DNMT3A-206ENST00000406659 RFPL3O75679 317 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 DOC2BQ14184 412 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 NXNL2Q5VZ03 156 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 CXXC5Q7LFL8 322 aaKnown RBP22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 ATCAYQ86WG3 371 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 OTULINQ96BN8 352 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 GAL3ST4Q96RP7 486 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 IFT27Q9BW83 186 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 NUDT9Q9BW91 350 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 VN1R1Q9GZP7 353 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 ENKD1Q9H0I2 346 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 GAREM1Q9H706 876 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 CARD8Q9Y2G2 431 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 PMF1-BGLAPU3KQ54 211 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 NUP210LQ5VU65 1888 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 PI4KAP42356 2102 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 TNRC6BQ9UPQ9 1833 aaKnown RBP22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 BHLHE40O14503 412 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 YKT6O15498 198 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 SOX3P41225 446 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 GPR143P51810 404 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 EFNA3P52797 238 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 DCAF7P61962 342 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 HLA-DQA1Q5Y7H0 255 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 LINC00114Q6XXX2 140 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 CPOQ8IVL8 374 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 LNX2Q8N448 690 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 OR9Q1Q8NGQ5 310 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 DNAJA4Q8WW22 397 aaPredicted RBP22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 CENPOQ9BU64 300 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 SYNDIG1Q9H7V2 258 aa22.68■■□□□ 1.22
DNMT3A-206ENST00000406659 C2orf92A0A1B0GVN3 265 aa22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 FAM86C2PA6NEL3 165 aa22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 SCDO00767 359 aa22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 PTP4A3O75365 173 aa22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 UTS2O95399 124 aa22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 HBQ1P09105 142 aa22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 ANKRD34CP0C6C1 535 aa22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 HTR1FP30939 366 aa22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 MLLT11Q13015 90 aaPredicted RBP22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 ZNF846Q147U1 533 aa22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 RABEPKQ7Z6M1 372 aa22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 OAFQ86UD1 273 aa22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 LAPTM4BQ86VI4 370 aa22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 FAM181AQ8N9Y4 354 aa22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 GATSQ8NAP1 163 aa22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 OR51A7Q8NH64 312 aa22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 ADIPOR1Q96A54 375 aa22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 RNF31Q96EP0 1072 aa22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 SLIRPQ9GZT3 109 aaKnown RBP22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 HMG20AQ9NP66 347 aa22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 HINT3Q9NQE9 182 aaKnown RBP22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 COPS7AQ9UBW8 275 aa22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 SEC16AO15027 2179 aa22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 LAMA1P25391 3075 aa22.67■■□□□ 1.22
DNMT3A-206ENST00000406659 TRAV27A0A087WT01 109 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 GTPBP1O00178 669 aaKnown RBP22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 NGFRP08138 427 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 ADH7P40394 386 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 CRYZQ08257 329 aaKnown RBP22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 SOWAHCQ53LP3 525 aaPredicted RBP22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 SLC35F1Q5T1Q4 408 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 RHBDD2Q6NTF9 364 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 C16orf87Q6PH81 154 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 GID4Q8IVV7 300 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 EID2Q8N6I1 236 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 BBS1Q8NFJ9 593 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 OR4D9Q8NGE8 314 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 S100ZQ8WXG8 99 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 FN3KQ9H479 309 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 ADAMTS20P59510 1910 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 A0A1W2PQM1 296 aa22.66■■□□□ 1.22
DNMT3A-206ENST00000406659 CLDN25C9JDP6 229 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms