RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 OR4D9Q8NGE8 314 aa2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 MRAPQ8TCY5 172 aa2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 N4BP2L2Q92802 583 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 CCNL2Q96S94 520 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 RHBGQ9H310 441 aa2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 FANCFQ9NPI8 374 aa2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 ZNF275Q9NSD4 429 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 UFSP2Q9NUQ7 469 aa2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 DPM3Q9P2X0 92 aa2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 SAMD4AQ9UPU9 718 aaKnown RBP2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 MOKQ9UQ07 419 aa2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 MRPS7Q9Y2R9 242 aaKnown RBP2.89□□□□□ -1.95
HMGB1P17-201ENST00000403495 CLRN2A0PK11 232 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 TUBAL3A6NHL2 446 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 TPST2O60704 377 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 PNMTP11086 282 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 KLK2P20151 261 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 CD80P33681 288 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 GCKP35557 465 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 LEPP41159 167 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 CASP4P49662 377 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 HMGN5P82970 282 aaKnown RBP2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 RIPPLY1Q0D2K3 151 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 TRIM16LQ309B1 348 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 SBK1Q52WX2 424 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 TMEM225Q6GV28 225 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 MOB3BQ86TA1 216 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 TPRA1Q86W33 373 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 ZNF679Q8IYX0 411 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 ZCCHC7Q8N3Z6 543 aaKnown RBP2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 SYT14Q8NB59 555 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 CATSPER1Q8NEC5 780 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 OR2A12Q8NGT7 310 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 IL1F10Q8WWZ1 152 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 EMG1Q92979 244 aaKnown RBP2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 TBX15Q96SF7 602 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 CITED1Q99966 193 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 RNF126Q9BV68 326 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 POLE4Q9NR33 117 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 SENP1Q9P0U3 644 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 PIPOXQ9P0Z9 390 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 OR1A1Q9P1Q5 309 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 UBQLN1Q9UMX0 589 aaKnown RBP2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 RABL2BQ9UNT1 228 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 SCML2Q9UQR0 700 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 VSIG4Q9Y279 399 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 AK6Q9Y3D8 172 aaKnown RBP2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 TIMM10BQ9Y5J6 103 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 IKBKGQ9Y6K9 419 aa2.88□□□□□ -1.95
HMGB1P17-201ENST00000403495 PTCH1Q13635 1447 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 IGLV8-61A0A075B6I0 122 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 IGHV2-70DA0A0C4DH43 119 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 KLF18A0A0U1RQI7 1052 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 DHRS7CA6NNS2 312 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 ERI2A8K979 691 aaKnown RBP2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 SULT2B1O00204 365 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 RGS16O15492 202 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 RS1O15537 224 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 PRKYO43930 277 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 N4BP1O75113 896 aaKnown RBP2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 SURF6O75683 361 aaKnown RBP2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 GNA14O95837 355 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 H2BFMP0C1H6 154 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 RBMY1CP0DJD4 496 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 ZNF44P15621 663 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 PRKXP51817 358 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 LIPNQ5VXI9 398 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 FRA10AC1Q70Z53 315 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 TRPM8Q7Z2W7 1104 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 TMEM110Q86TL2 294 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 MTURNQ8N3F0 131 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 LINC00612Q8N6U2 182 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 C15orf54Q8N8G6 183 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 EIF1ADQ8N9N8 165 aaKnown RBP2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 OR5D13Q8NGL4 314 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 OR13F1Q8NGS4 319 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 ZNF606Q8WXB4 792 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 RLN3Q8WXF3 142 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 RAPGEF5Q92565 580 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 FAF2Q96CS3 445 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 CNOT6LQ96LI5 555 aaKnown RBP2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 IL4I1Q96RQ9 567 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 MCHR1Q99705 422 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 TMEM43Q9BTV4 400 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 PAXXQ9BUH6 204 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 LRRN3Q9H3W5 708 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 APMAPQ9HDC9 416 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 SMOXQ9NWM0 555 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 WARS2Q9UGM6 360 aaKnown RBP2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 CLEC4EQ9ULY5 219 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 RPH3ALQ9UNE2 315 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 FLVCR1Q9Y5Y0 555 aa2.87□□□□□ -1.95
HMGB1P17-201ENST00000403495 SYNJ2BP-COX16A0A087WUM0 186 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 SMIM28A0A1B0GU29 152 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 A0A1B0GUS0 222 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 FAM168BA1KXE4 195 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 NPIPA7E9PJI5 369 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 CXCL11O14625 94 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 TAPBPO15533 448 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 SRSF10O75494 262 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms