RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	OR4K17	Q8NGC6	315 aa		6.05	□□□□□ -1.44
CEACAM1-208	ENST00000403461	UBTD2	Q8WUN7	234 aa		6.05	□□□□□ -1.44
CEACAM1-208	ENST00000403461	ADIPOR1	Q96A54	375 aa		6.05	□□□□□ -1.44
CEACAM1-208	ENST00000403461	STARD4	Q96DR4	205 aa		6.05	□□□□□ -1.44
CEACAM1-208	ENST00000403461	NODAL	Q96S42	347 aa		6.05	□□□□□ -1.44
CEACAM1-208	ENST00000403461	SERPINI1	Q99574	410 aa		6.05	□□□□□ -1.44
CEACAM1-208	ENST00000403461	KLHL4	Q9C0H6	718 aa		6.05	□□□□□ -1.44
CEACAM1-208	ENST00000403461	STMN4	Q9H169	189 aa	Predicted RBP	6.05	□□□□□ -1.44
CEACAM1-208	ENST00000403461	NXF5	Q9H1B4	397 aa	Known RBP	6.05	□□□□□ -1.44
CEACAM1-208	ENST00000403461	OPN3	Q9H1Y3	402 aa	Predicted RBP	6.05	□□□□□ -1.44
CEACAM1-208	ENST00000403461	ALG9	Q9H6U8	611 aa		6.05	□□□□□ -1.44
CEACAM1-208	ENST00000403461	DDX31	Q9H8H2	851 aa	Known RBP	6.05	□□□□□ -1.44
CEACAM1-208	ENST00000403461	NMRAL1	Q9HBL8	299 aa		6.05	□□□□□ -1.44
CEACAM1-208	ENST00000403461	YAE1D1	Q9NRH1	226 aa		6.05	□□□□□ -1.44
CEACAM1-208	ENST00000403461	ZNF701	Q9NV72	531 aa	Predicted RBP	6.05	□□□□□ -1.44
CEACAM1-208	ENST00000403461	BCAP29	Q9UHQ4	241 aa		6.05	□□□□□ -1.44
CEACAM1-208	ENST00000403461	MID2	Q9UJV3	735 aa		6.05	□□□□□ -1.44
CEACAM1-208	ENST00000403461	PSME2	Q9UL46	239 aa		6.05	□□□□□ -1.44
CEACAM1-208	ENST00000403461	ZNF175	Q9Y473	711 aa		6.05	□□□□□ -1.44
CEACAM1-208	ENST00000403461	ASB4	Q9Y574	426 aa		6.05	□□□□□ -1.44
CEACAM1-208	ENST00000403461	WIF1	Q9Y5W5	379 aa		6.05	□□□□□ -1.44
CEACAM1-208	ENST00000403461	TEX264	Q9Y6I9	313 aa		6.05	□□□□□ -1.44
CEACAM1-208	ENST00000403461	HEATR5B	Q9P2D3	2071 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	FRG2C	A6NGY1	282 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	OR6C70	A6NIJ9	312 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	VWC2L	B2RUY7	222 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461		H0YIV9	168 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	FOXE1	O00358	373 aa	Predicted RBP	6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	EMC8	O43402	210 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	HCRTR2	O43614	444 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	TMPRSS11D	O60235	418 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	UGDH	O60701	494 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	KERA	O60938	352 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	REM1	O75628	298 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	BCAS2	O75934	225 aa	Predicted RBP	6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	TGM6	O95932	706 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	FES	P07332	822 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	CHRM2	P08172	466 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	GFAP	P14136	432 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	CPM	P14384	443 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	POR	P16435	677 aa	Predicted RBP	6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	EPOR	P19235	508 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	CSNK2A2	P19784	350 aa	Predicted RBP	6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	TBXA2R	P21731	343 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	DRD5	P21918	477 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	DPP4	P27487	766 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	IL12B	P29460	328 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	IDUA	P35475	653 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	BSG	P35613	385 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	GP5	P40197	560 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	PTDSS1	P48651	473 aa	Known RBP	6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	STAR	P49675	285 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	PRKAG1	P54619	331 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	DSCR4	P56555	118 aa	Predicted RBP	6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	RPS3A	P61247	264 aa	Known RBP	6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	HMGCS1	Q01581	520 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	DR1	Q01658	176 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	PDIA2	Q13087	525 aa	Known RBP	6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	GANAB	Q14697	944 aa	Known RBP	6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	CLEC12B	Q2HXU8	276 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	EXOC3L2	Q2M3D2	409 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	CHRFAM7A	Q494W8	412 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	CCNYL2	Q5T2Q4	361 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	RAET1L	Q5VY80	246 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	TTC19	Q6DKK2	380 aa	Predicted RBP	6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	ZNF474	Q6S9Z5	364 aa	Predicted RBP	6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	ZNF550	Q7Z398	422 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	ZBED8	Q8IZ13	594 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	TEX9	Q8N6V9	391 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	ZNF611	Q8N823	705 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	ZNF615	Q8N8J6	731 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	PYROXD1	Q8WU10	500 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	HGD	Q93099	445 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	ATP6V1E2	Q96A05	226 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	CTHRC1	Q96CG8	243 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	COL21A1	Q96P44	957 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	GPR22	Q99680	433 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	CPNE1	Q99829	537 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	ELAC2	Q9BQ52	826 aa	Known RBP	6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	LRRC1	Q9BTT6	524 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	FAIM2	Q9BWQ8	316 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	PINK1	Q9BXM7	581 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	ITPA	Q9BY32	194 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	PRRG4	Q9BZD6	226 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	DDX47	Q9H0S4	455 aa	Known RBP	6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	CAB39L	Q9H9S4	337 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	PPCS	Q9HAB8	311 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	PLAC1	Q9HBJ0	212 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	PFDN4	Q9NQP4	134 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	SDHAF3	Q9NRP4	125 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	PSD3	Q9NYI0	1048 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	EHD3	Q9NZN3	535 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	MRPS18C	Q9Y3D5	142 aa	Known RBP	6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	SNX8	Q9Y5X2	465 aa		6.04	□□□□□ -1.44
CEACAM1-208	ENST00000403461	ZNF407	Q9C0G0	2248 aa		6.03	□□□□□ -1.44
CEACAM1-208	ENST00000403461	ATR	Q13535	2644 aa		6.03	□□□□□ -1.44
CEACAM1-208	ENST00000403461	VPS13C	Q709C8	3753 aa		6.03	□□□□□ -1.44
CEACAM1-208	ENST00000403461	SCN3A	Q9NY46	2000 aa		6.03	□□□□□ -1.44
CEACAM1-208	ENST00000403461		A0A087X1B8	175 aa		6.03	□□□□□ -1.44
CEACAM1-208	ENST00000403461	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	6.03	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms