RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 OR2T33Q8NG76 320 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 ZNF461Q8TAF7 563 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 RHOVQ96L33 236 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 LRRN3Q9H3W5 708 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 ZDHHC4Q9NPG8 344 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 IFT46Q9NQC8 304 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 PFDN2Q9UHV9 154 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 IRAK3Q9Y616 596 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 OR6C74A6NCV1 312 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 ANXA2P2A6NMY6 339 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 NRG2O14511 850 aaPredicted RBP9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 GNB5O14775 395 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 CBX7O95931 251 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 NOS3P29474 1203 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 TGM3Q08188 693 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 APOOLQ6UXV4 268 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 C8orf86Q6ZUL3 223 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 CPXM2Q8N436 756 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 OR2A12Q8NGT7 310 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 ASB12Q8WXK4 309 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 CNOT9Q92600 299 aaKnown RBP9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 FERD3LQ96RJ6 166 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 GAL3ST1Q99999 423 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 XKR8Q9H6D3 395 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 ASB6Q9NWX5 421 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 SPG21Q9NZD8 308 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 POMT2Q9UKY4 750 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 HELZP42694 1942 aaKnown RBP9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 A0A1B0GVI7 797 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 TMEM238LA0A1B0GVL6 79 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 LATO43561 262 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 PEX14O75381 377 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 PSMB10P40306 273 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 NAA10P41227 235 aaPredicted RBP9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 RIN1Q13671 783 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 C11orf88Q6PI97 169 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 DEFB128Q7Z7B8 93 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 RFLNBQ8N5W9 214 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 IL17RCQ8NAC3 791 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 OR5J2Q8NH18 312 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 OR51Q1Q8NH59 317 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 LGALS14Q8TCE9 139 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 OSTF1Q92882 214 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 FGF11Q92914 225 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 OR1F2PQ96R84 312 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 NDC1Q9BTX1 674 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 IFT27Q9BW83 186 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 UBQLN3Q9H347 655 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 FAM86C1Q9NVL1 165 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 CPNE7Q9UBL6 633 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 KLF15Q9UIH9 416 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 ACAD8Q9UKU7 415 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 SLC7A7Q9UM01 511 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 LIPT1Q9Y234 373 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 CCL26Q9Y258 94 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 SLC45A1Q9Y2W3 748 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 BACE2Q9Y5Z0 518 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 FKBP7Q9Y680 259 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 VWA8A3KMH1 1905 aa9.18□□□□□ -0.94
PTCHD4-202ENST00000398738 PLXND1Q9Y4D7 1925 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 KIAA0355O15063 1070 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 SAGP10523 405 aaPredicted RBP9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 CFL1P23528 166 aaKnown RBP9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 F8A1P23610 371 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 HTR1FP30939 366 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 ST3GAL3Q11203 375 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 ELAVL2Q12926 359 aaKnown RBP9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 FZD5Q13467 585 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 ZNF273Q14593 569 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 FAM74A1Q5RGS3 127 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 CCNJQ5T5M9 372 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 ZDHHC20Q5W0Z9 365 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 BTN2A1Q7KYR7 527 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 ZNF614Q8N883 585 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 OR52H1Q8NGJ2 320 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 OR52I2Q8NH67 350 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 OR56B4Q8NH76 319 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 VOPP1Q96AW1 172 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 SCLYQ96I15 445 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 RADILQ96JH8 1075 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 PDCD1LG2Q9BQ51 273 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 GPR174Q9BXC1 333 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 RETREG1Q9H6L5 497 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 LYARQ9NX58 379 aaKnown RBP9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 MARK1Q9P0L2 795 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 NPIPA5A0A0B4J1W7 369 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 CDHR4A6H8M9 788 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 MEIS3P1A6NDR6 274 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 NPIPA7E9PJI5 369 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 PI15O43692 258 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 LCMT2O60294 686 aaKnown RBP9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 GREM1O60565 184 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 ADAMTS4O75173 837 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 TBX6O95947 436 aaPredicted RBP9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 NPIPA8P0DM63 369 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 NFYAP23511 347 aaPredicted RBP9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 GRPRP30550 384 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 OMPP47874 163 aa9.17□□□□□ -0.94
PTCHD4-202ENST00000398738 EPHB3P54753 998 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms