RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 KLHL28Q9NXS3 571 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 NKIRAS1Q9NYS0 192 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 ZNF226Q9NYT6 803 aa12.01□□□□□ -0.49
VCX3A-202ENST00000398729 SLCO1B7G3V0H7 640 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 C16orf97H3BN30 126 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 SDHDO14521 159 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 ZNF195O14628 629 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 SS18L1O75177 396 aaPredicted RBP12□□□□□ -0.49
VCX3A-202ENST00000398729 SNNO75324 88 aaPredicted RBP12□□□□□ -0.49
VCX3A-202ENST00000398729 RAF1P04049 648 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 ALDOCP09972 364 aaKnown RBP12□□□□□ -0.49
VCX3A-202ENST00000398729 PABPC4LP0CB38 370 aaKnown RBP12□□□□□ -0.49
VCX3A-202ENST00000398729 OR12D1P0DN82 309 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 PRKCAP17252 672 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 IL11P20809 199 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 CHI3L1P36222 383 aaPredicted RBP12□□□□□ -0.49
VCX3A-202ENST00000398729 CCR4P51679 360 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 CASP9P55211 416 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 CBFBQ13951 182 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 KEAP1Q14145 624 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 ZNF141Q15928 474 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 SAXO2Q658L1 398 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 HEPHL1Q6MZM0 1159 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 WFDC11Q8NEX6 87 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 RAB3IL1Q8TBN0 382 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 XAGE5Q8WWM1 108 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 CPNE4Q96A23 557 aaPredicted RBP12□□□□□ -0.49
VCX3A-202ENST00000398729 ARL8AQ96BM9 186 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 MBD6Q96DN6 1003 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 ARSGQ96EG1 525 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 WFIKKN1Q96NZ8 548 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 MDFIQ99750 246 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 SLC35A5Q9BS91 424 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 ZNF350Q9GZX5 532 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 PLEKHF2Q9H8W4 249 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 PLSCR4Q9NRQ2 329 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 AIG1Q9NVV5 245 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 MARCOQ9UEW3 520 aaPredicted RBP12□□□□□ -0.49
VCX3A-202ENST00000398729 BTNL2Q9UIR0 455 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 MKLN1Q9UL63 735 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 CLEC4AQ9UMR7 237 aa12□□□□□ -0.49
VCX3A-202ENST00000398729 FCMRO60667 390 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 UGT2B17O75795 530 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 CYP7B1O75881 506 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 CSTAP01040 98 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 KITP10721 976 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 EPHA3P29320 983 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 SHC1P29353 583 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 CCKARP32238 428 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 KHKP50053 298 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 NME5P56597 212 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 UFM1P61960 85 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 LRRC74AQ0VAA2 488 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 QPRTQ15274 297 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 TOMM34Q15785 309 aaPredicted RBP11.99□□□□□ -0.49
VCX3A-202ENST00000398729 EXOC3L2Q2M3D2 409 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 TMEM176BQ3YBM2 270 aaPredicted RBP11.99□□□□□ -0.49
VCX3A-202ENST00000398729 TNFAIP8L2Q6P589 184 aaPredicted RBP11.99□□□□□ -0.49
VCX3A-202ENST00000398729 STK32CQ86UX6 486 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 TRIML2Q8N7C3 387 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 ATP6V1C2Q8NEY4 427 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 OIT3Q8WWZ8 545 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 RAB8BQ92930 207 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 NEURL3Q96EH8 262 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 TEX37Q96LM6 180 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 CCDC115Q96NT0 180 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 PANX1Q96RD7 426 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 ZBTB18Q99592 522 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 KLHL4Q9C0H6 718 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 LAT2Q9GZY6 243 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 TMBIM4Q9HC24 238 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 FANCFQ9NPI8 374 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 POLE3Q9NRF9 147 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 KCNE5Q9UJ90 142 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 WDR45Q9Y484 360 aa11.99□□□□□ -0.49
VCX3A-202ENST00000398729 GOLGA8QA0A0J9YX86 632 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 GOLGA8OA6NCC3 632 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 GOLGA8NF8WBI6 632 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 EFNA2O43921 213 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 KIAA0513O60268 411 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 NTN1O95631 604 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 PGRP06401 933 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 GUSBP08236 651 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 SLC7A1P30825 629 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 HOXC12P31275 282 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 HPCAP84074 193 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 SELENBP1Q13228 472 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 SKP2Q13309 424 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 RNPS1Q15287 305 aaKnown RBP11.98□□□□□ -0.49
VCX3A-202ENST00000398729 ZNF239Q16600 458 aaKnown RBP11.98□□□□□ -0.49
VCX3A-202ENST00000398729 SLC25A53Q5H9E4 307 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 BEND6Q5SZJ8 279 aaPredicted RBP11.98□□□□□ -0.49
VCX3A-202ENST00000398729 NXNQ6DKJ4 435 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 TYW3Q6IPR3 259 aaKnown RBP11.98□□□□□ -0.49
VCX3A-202ENST00000398729 BEND4Q6ZU67 534 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 EIF3MQ7L2H7 374 aaKnown RBP11.98□□□□□ -0.49
VCX3A-202ENST00000398729 OLIG3Q7RTU3 272 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 ZNF550Q7Z398 422 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 BIVMQ86UB2 503 aa11.98□□□□□ -0.49
VCX3A-202ENST00000398729 RNF128Q8TEB7 428 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms