RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 ACTG2P63267 376 aa10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 CDK5R2Q13319 367 aa10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 EIF2B1Q14232 305 aaKnown RBP10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 COQ5Q5HYK3 327 aa10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 OR7E24Q6IFN5 339 aa10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 RETREG3Q86VR2 466 aa10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 PDXPQ96GD0 296 aa10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 OR7D2Q96RA2 312 aa10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 SAP130Q9H0E3 1048 aa10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 FGF22Q9HCT0 170 aa10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 ALPK2Q86TB3 2170 aa10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 IFNA7P01567 189 aa10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 PBX2P40425 430 aa10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 RPS5P46782 204 aaKnown RBP10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 RGS19P49795 217 aa10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 FGL2Q14314 439 aa10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 NR0B2Q15466 257 aa10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 SLC22A6Q4U2R8 563 aa10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 LSM14AQ8ND56 463 aaKnown RBP10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 LHPPQ9H008 270 aa10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 OR52D1Q9H346 318 aa10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 MAN2C1Q9NTJ4 1040 aa10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 KCNN3Q9UGI6 736 aa10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 PCDHA9Q9Y5H5 950 aa10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 HEMK1Q9Y5R4 338 aaPredicted RBP10.8□□□□□ -0.68
PCDHGA8-201ENST00000398604 TMEM202A6NGA9 273 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 H7C417 338 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 WDPCPO95876 746 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 ERCC1P07992 297 aaPredicted RBP10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 IRF2P14316 349 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 VASPP50552 380 aaPredicted RBP10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 ART1P52961 327 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 TMBIM6P55061 237 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 GLO1Q04760 184 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 FRMPD2BQ6IN97 320 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 PODNL1Q6PEZ8 512 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 HAGHLQ6PII5 290 aaPredicted RBP10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 MRPL21Q7Z2W9 205 aaKnown RBP10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 ABHD12BQ7Z5M8 362 aaPredicted RBP10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 COQ8AQ8NI60 647 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 CD300LFQ8TDQ1 290 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 TUBA1CQ9BQE3 449 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 TIMM29Q9BSF4 260 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 DUSP23Q9BVJ7 150 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 DNTTIP1Q9H147 329 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 B3GNT3Q9Y2A9 372 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 A0A0A6YYH2 397 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 C7orf72A4D263 438 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 HMX3A6NHT5 357 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 A6NJ64 397 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 H7C1C5 153 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 CRTAPO75718 401 aaPredicted RBP10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 DIRAS3O95661 229 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 HPRP00739 348 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 LIPCP11150 499 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 BMP2P12643 396 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 UGT2B7P16662 529 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 LCN6P62502 163 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 VEZF1Q14119 521 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 CDKL4Q5MAI5 379 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 CYP4V2Q6ZWL3 525 aaPredicted RBP10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 PHC2Q8IXK0 858 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 OR5K2Q8NHB8 316 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 ARSGQ96EG1 525 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 NECAB3Q96P71 396 aaPredicted RBP10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 MLXQ9UH92 298 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 CBLCQ9ULV8 474 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 B3GALT1Q9Y5Z6 326 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 GRXCR2A6NFK2 248 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 DNASE1P24855 282 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 SEC61A1P61619 476 aaKnown RBP10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 TMEM201Q5SNT2 666 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 LCN10Q6JVE6 187 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 LSMEM2Q8N112 164 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 ARL6Q9H0F7 186 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 OR51E2Q9H255 320 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 MAGIXQ9H6Y5 334 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 DNAJB11Q9UBS4 358 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 PCDHGA8Q9Y5G5 932 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 AP1M2Q9Y6Q5 423 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 POLR2AP24928 1970 aaKnown RBP10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 KIF13BQ9NQT8 1826 aa10.79□□□□□ -0.68
PCDHGA8-201ENST00000398604 IGHV3-20A0A0C4DH32 117 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 PRRT4C9JH25 899 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 ADRA1AP35348 466 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 ZNF45Q02386 682 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 MRPL2Q5T653 305 aaKnown RBP10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 CPZQ66K79 652 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 UNQ6126/PRO20091Q6UXV3 157 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 ACOT12Q8WYK0 555 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 MYNNQ9NPC7 610 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 THSD1Q9NS62 852 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 MGAT4CQ9UBM8 478 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 CNOT11Q9UKZ1 510 aaKnown RBP10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 MCTS1Q9ULC4 181 aaKnown RBP10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 MED16Q9Y2X0 877 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 KIAA1217Q5T5P2 1943 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 LOXHD1Q8IVV2 1947 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 H0YJX3 145 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms