RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 CDC20Q12834 499 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 DOC2BQ14184 412 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 ELOAQ14241 798 aaKnown RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 ZIC1Q15915 447 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 NDUFA9Q16795 377 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 MEPCEQ7L2J0 689 aaKnown RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 OR4N4Q8N0Y3 316 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 DPAGT1Q9H3H5 408 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SPATA2Q9UM82 520 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 CBY1Q9Y3M2 126 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 POLR1CO15160 346 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SMAD9O15198 467 aaKnown RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 HOXC11O43248 304 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 ORC5O43913 435 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SNAPC5O75971 98 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 ADH1BP00325 375 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 DHFRP00374 187 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 CD3GP09693 182 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 CPMP14384 443 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 TRA2BP62995 288 aaKnown RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 MAT1AQ00266 395 aaKnown RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 RAB40BQ12829 278 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 FGL2Q14314 439 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 OR1Q1Q15612 314 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 NTRK2Q16620 822 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 HES5Q5TA89 166 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 KIAA1211LQ6NV74 962 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SAMD12Q8N8I0 201 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 TP53I13Q8NBR0 393 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 PFN4Q8NHR9 129 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SFXN5Q8TD22 340 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SLC25A18Q9H1K4 315 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 LMAN1LQ9HAT1 526 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SIRT3Q9NTG7 399 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 FKBP14Q9NWM8 211 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF69Q9UC07 566 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 TRAPPC13A5PLN9 417 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 C4orf51C9J302 202 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 LINC01565O15544 149 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 ELAVL3Q14576 367 aaKnown RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 USF2Q15853 346 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 DECR1Q16698 335 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 OR2T33Q8NG76 320 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 OR52E2Q8NGJ4 325 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 OR8K3Q8NH51 312 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 ACOT11Q8WXI4 607 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 OR1E3Q8WZA6 343 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SRRQ9GZT4 340 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 HINT3Q9NQE9 182 aaKnown RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 HRASLS2Q9NWW9 162 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 BABAM2Q9NXR7 383 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 KCMF1Q9P0J7 381 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 CACNA1BQ00975 2339 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 H0Y8X5 98 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 DVL1O14640 695 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 PRODHO43272 600 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 RNF13O43567 381 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 NARSO43776 548 aaKnown RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 IFNA7P01567 189 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 MBP02144 154 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SNRPBP14678 240 aaKnown RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 MAOBP27338 520 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 DVL1P1P54792 670 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 PPP2CBP62714 309 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 TAF13Q15543 124 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 TMEM44Q2T9K0 475 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 Q71RC1 249 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SLC35B4Q969S0 331 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 INTS12Q96CB8 462 aaKnown RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SLC25A36Q96CQ1 311 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 ELP4Q96EB1 424 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 ADAD1Q96M93 576 aaKnown RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SLC38A1Q9H2H9 487 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 SRA1Q9HD15 236 aaKnown RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 WASH6PQ9NQA3 447 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 GNG8Q9UK08 70 aa4.6□□□□□ -1.67
SMAD4-202ENST00000398417 GREB1LQ9C091 1923 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-202ENST00000398417 TCRBV21S2A2A0A5A6 115 aa4.59□□□□□ -1.67
SMAD4-202ENST00000398417 GTPBP1O00178 669 aaKnown RBP4.59□□□□□ -1.67
SMAD4-202ENST00000398417 KHDRBS3O75525 346 aaKnown RBP4.59□□□□□ -1.67
SMAD4-202ENST00000398417 CEACAM5P06731 702 aa4.59□□□□□ -1.67
SMAD4-202ENST00000398417 DBIP07108 87 aaKnown RBP4.59□□□□□ -1.67
SMAD4-202ENST00000398417 ENDOUP21128 410 aaKnown RBP4.59□□□□□ -1.67
SMAD4-202ENST00000398417 DDOSTP39656 456 aa4.59□□□□□ -1.67
SMAD4-202ENST00000398417 LIMS1P48059 325 aa4.59□□□□□ -1.67
SMAD4-202ENST00000398417 MFSD12Q6NUT3 480 aa4.59□□□□□ -1.67
SMAD4-202ENST00000398417 COMTD1Q86VU5 262 aa4.59□□□□□ -1.67
SMAD4-202ENST00000398417 IQCF2Q8IXL9 164 aa4.59□□□□□ -1.67
SMAD4-202ENST00000398417 SLC35F2Q8IXU6 374 aa4.59□□□□□ -1.67
SMAD4-202ENST00000398417 FAM26EQ8N5C1 309 aa4.59□□□□□ -1.67
SMAD4-202ENST00000398417 CAMKVQ8NCB2 501 aa4.59□□□□□ -1.67
SMAD4-202ENST00000398417 MSLNLQ96KJ4 702 aa4.59□□□□□ -1.67
SMAD4-202ENST00000398417 HSPA12BQ96MM6 686 aa4.59□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF559Q9BR84 538 aa4.59□□□□□ -1.67
SMAD4-202ENST00000398417 C1QTNF7Q9BXJ2 289 aa4.59□□□□□ -1.67
SMAD4-202ENST00000398417 NXF5Q9H1B4 397 aaKnown RBP4.59□□□□□ -1.67
SMAD4-202ENST00000398417 SLC25A19Q9HC21 320 aa4.59□□□□□ -1.67
SMAD4-202ENST00000398417 EIF3KQ9UBQ5 218 aaKnown RBP4.59□□□□□ -1.67
SMAD4-202ENST00000398417 LSM2Q9Y333 95 aaKnown RBP4.59□□□□□ -1.67
SMAD4-202ENST00000398417 IER3IP1Q9Y5U9 82 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms