RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 FAM71CQ8NEG0 241 aa23.04■■□□□ 1.28
U2AF1-203ENST00000398137 FAM83FQ8NEG4 500 aaPredicted RBP23.04■■□□□ 1.28
U2AF1-203ENST00000398137 ZNF607Q96SK3 696 aa23.04■■□□□ 1.28
U2AF1-203ENST00000398137 PTGES2Q9H7Z7 377 aa23.04■■□□□ 1.28
U2AF1-203ENST00000398137 CHST11Q9NPF2 352 aa23.04■■□□□ 1.28
U2AF1-203ENST00000398137 PACSIN3Q9UKS6 424 aa23.04■■□□□ 1.28
U2AF1-203ENST00000398137 CREBBPQ92793 2442 aa23.04■■□□□ 1.28
U2AF1-203ENST00000398137 PHF3Q92576 2039 aaKnown RBP23.04■■□□□ 1.28
U2AF1-203ENST00000398137 MYO9AB2RTY4 2548 aa23.03■■□□□ 1.28
U2AF1-203ENST00000398137 GCM2O75603 506 aaPredicted RBP23.03■■□□□ 1.28
U2AF1-203ENST00000398137 IGHG3P01860 377 aa23.03■■□□□ 1.28
U2AF1-203ENST00000398137 HPNP05981 417 aa23.03■■□□□ 1.28
U2AF1-203ENST00000398137 MSX1P28360 303 aa23.03■■□□□ 1.28
U2AF1-203ENST00000398137 SRD5A2P31213 254 aa23.03■■□□□ 1.28
U2AF1-203ENST00000398137 DSCR4P56555 118 aaPredicted RBP23.03■■□□□ 1.28
U2AF1-203ENST00000398137 EIPR1Q53HC9 387 aa23.03■■□□□ 1.28
U2AF1-203ENST00000398137 ZNF311Q5JNZ3 666 aa23.03■■□□□ 1.28
U2AF1-203ENST00000398137 WIPI1Q5MNZ9 446 aaPredicted RBP23.03■■□□□ 1.28
U2AF1-203ENST00000398137 INTS11Q5TA45 600 aaKnown RBP23.03■■□□□ 1.28
U2AF1-203ENST00000398137 RNF148Q8N7C7 305 aa23.03■■□□□ 1.28
U2AF1-203ENST00000398137 CNOT9Q92600 299 aaKnown RBP23.03■■□□□ 1.28
U2AF1-203ENST00000398137 C1GALT1C1Q96EU7 318 aa23.03■■□□□ 1.28
U2AF1-203ENST00000398137 DTNBP1Q96EV8 351 aa23.03■■□□□ 1.28
U2AF1-203ENST00000398137 KCTD14Q9BQ13 255 aaPredicted RBP23.03■■□□□ 1.28
U2AF1-203ENST00000398137 OR2B2Q9GZK3 357 aa23.03■■□□□ 1.28
U2AF1-203ENST00000398137 LAT2Q9GZY6 243 aa23.03■■□□□ 1.28
U2AF1-203ENST00000398137 LDAHQ9H6V9 325 aa23.03■■□□□ 1.28
U2AF1-203ENST00000398137 DNAJB12Q9NXW2 375 aaKnown RBP23.03■■□□□ 1.28
U2AF1-203ENST00000398137 ICAM5Q9UMF0 924 aa23.03■■□□□ 1.28
U2AF1-203ENST00000398137 IFT52Q9Y366 437 aa23.03■■□□□ 1.28
U2AF1-203ENST00000398137 ELOVL7A1L3X0 281 aa23.02■■□□□ 1.28
U2AF1-203ENST00000398137 EIF4E2O60573 245 aaKnown RBP23.02■■□□□ 1.28
U2AF1-203ENST00000398137 NUDT14O95848 222 aa23.02■■□□□ 1.28
U2AF1-203ENST00000398137 OPN1SWP03999 348 aa23.02■■□□□ 1.28
U2AF1-203ENST00000398137 P2RX1P51575 399 aa23.02■■□□□ 1.28
U2AF1-203ENST00000398137 SUMO3P55854 103 aaPredicted RBP23.02■■□□□ 1.28
U2AF1-203ENST00000398137 EEF1A1P68104 462 aaKnown RBP23.02■■□□□ 1.28
U2AF1-203ENST00000398137 ARSKQ6UWY0 536 aa23.02■■□□□ 1.28
U2AF1-203ENST00000398137 TRILQ7L0X0 811 aa23.02■■□□□ 1.28
U2AF1-203ENST00000398137 ARMC8Q8IUR7 673 aa23.02■■□□□ 1.28
U2AF1-203ENST00000398137 ZNF295-AS1Q8N0V1 137 aa23.02■■□□□ 1.28
U2AF1-203ENST00000398137 ACBD4Q8NC06 268 aa23.02■■□□□ 1.28
U2AF1-203ENST00000398137 OR14L1PQ8NHC6 308 aa23.02■■□□□ 1.28
U2AF1-203ENST00000398137 SPATA5L1Q9BVQ7 753 aa23.02■■□□□ 1.28
U2AF1-203ENST00000398137 EXO5Q9H790 373 aa23.02■■□□□ 1.28
U2AF1-203ENST00000398137 RLIMQ9NVW2 624 aa23.02■■□□□ 1.28
U2AF1-203ENST00000398137 TAS2R10Q9NYW0 307 aa23.02■■□□□ 1.28
U2AF1-203ENST00000398137 ZNF232Q9UNY5 417 aa23.02■■□□□ 1.28
U2AF1-203ENST00000398137 PDZD2O15018 2839 aa23.02■■□□□ 1.28
U2AF1-203ENST00000398137 TRGV5A0A0B4J1U4 118 aa23.01■■□□□ 1.27
U2AF1-203ENST00000398137 HK1P19367 917 aa23.01■■□□□ 1.27
U2AF1-203ENST00000398137 VEZF1Q14119 521 aa23.01■■□□□ 1.27
U2AF1-203ENST00000398137 GANABQ14697 944 aaKnown RBP23.01■■□□□ 1.27
U2AF1-203ENST00000398137 RNF220Q5VTB9 566 aa23.01■■□□□ 1.27
U2AF1-203ENST00000398137 PATL1Q86TB9 770 aaKnown RBP23.01■■□□□ 1.27
U2AF1-203ENST00000398137 CLIP4Q8N3C7 705 aa23.01■■□□□ 1.27
U2AF1-203ENST00000398137 CDRT15Q96T59 188 aa23.01■■□□□ 1.27
U2AF1-203ENST00000398137 RSPO3Q9BXY4 272 aaPredicted RBP23.01■■□□□ 1.27
U2AF1-203ENST00000398137 ACKR4Q9NPB9 350 aa23.01■■□□□ 1.27
U2AF1-203ENST00000398137 MED17Q9NVC6 651 aa23.01■■□□□ 1.27
U2AF1-203ENST00000398137 TNFRSF10DQ9UBN6 386 aa23.01■■□□□ 1.27
U2AF1-203ENST00000398137 VDAC3Q9Y277 283 aa23.01■■□□□ 1.27
U2AF1-203ENST00000398137 RPH3AQ9Y2J0 694 aaPredicted RBP23.01■■□□□ 1.27
U2AF1-203ENST00000398137 CHST2Q9Y4C5 530 aa23.01■■□□□ 1.27
U2AF1-203ENST00000398137 HCFC1P51610 2035 aa23■■□□□ 1.27
U2AF1-203ENST00000398137 A0A1B0GVC2 190 aa23■■□□□ 1.27
U2AF1-203ENST00000398137 CDHR4A6H8M9 788 aa23■■□□□ 1.27
U2AF1-203ENST00000398137 PRORSD1PA6NEY8 169 aa23■■□□□ 1.27
U2AF1-203ENST00000398137 M0QX08 132 aa23■■□□□ 1.27
U2AF1-203ENST00000398137 DNAJA2O60884 412 aa23■■□□□ 1.27
U2AF1-203ENST00000398137 SERPINB7O75635 380 aa23■■□□□ 1.27
U2AF1-203ENST00000398137 ZNF41P51814 821 aaPredicted RBP23■■□□□ 1.27
U2AF1-203ENST00000398137 DMTNQ08495 405 aa23■■□□□ 1.27
U2AF1-203ENST00000398137 C6orf89Q6UWU4 347 aa23■■□□□ 1.27
U2AF1-203ENST00000398137 CCDC80Q76M96 950 aa23■■□□□ 1.27
U2AF1-203ENST00000398137 TOR1AIP2Q8NFQ8 470 aa23■■□□□ 1.27
U2AF1-203ENST00000398137 OR5W2Q8NH69 310 aa23■■□□□ 1.27
U2AF1-203ENST00000398137 TAMM41Q96BW9 452 aa23■■□□□ 1.27
U2AF1-203ENST00000398137 SDCCAG3Q96C92 435 aa23■■□□□ 1.27
U2AF1-203ENST00000398137 PNPLA3Q9NST1 481 aa23■■□□□ 1.27
U2AF1-203ENST00000398137 SLC6A5Q9Y345 797 aa23■■□□□ 1.27
U2AF1-203ENST00000398137 FAM47E-STBD1D6RA91 191 aa22.99■■□□□ 1.27
U2AF1-203ENST00000398137 NPIPA2E9PIF3 369 aa22.99■■□□□ 1.27
U2AF1-203ENST00000398137 NPIPA3F8WFD2 350 aa22.99■■□□□ 1.27
U2AF1-203ENST00000398137 GSTA4O15217 222 aa22.99■■□□□ 1.27
U2AF1-203ENST00000398137 ZIC3O60481 467 aa22.99■■□□□ 1.27
U2AF1-203ENST00000398137 TPST1O60507 370 aa22.99■■□□□ 1.27
U2AF1-203ENST00000398137 MFN2O95140 757 aa22.99■■□□□ 1.27
U2AF1-203ENST00000398137 PRKAR1BP31321 381 aa22.99■■□□□ 1.27
U2AF1-203ENST00000398137 PTGER4P35408 488 aa22.99■■□□□ 1.27
U2AF1-203ENST00000398137 CRYBA2P53672 197 aa22.99■■□□□ 1.27
U2AF1-203ENST00000398137 GXYLT1Q4G148 440 aa22.99■■□□□ 1.27
U2AF1-203ENST00000398137 SAMD4BQ5PRF9 694 aaKnown RBP22.99■■□□□ 1.27
U2AF1-203ENST00000398137 RAET1LQ5VY80 246 aa22.99■■□□□ 1.27
U2AF1-203ENST00000398137 DHRS4L2Q6PKH6 230 aa22.99■■□□□ 1.27
U2AF1-203ENST00000398137 COMTD1Q86VU5 262 aa22.99■■□□□ 1.27
U2AF1-203ENST00000398137 SMYD1Q8NB12 490 aa22.99■■□□□ 1.27
U2AF1-203ENST00000398137 FAM156AQ8NDB6 213 aa22.99■■□□□ 1.27
U2AF1-203ENST00000398137 NEIL3Q8TAT5 605 aa22.99■■□□□ 1.27
U2AF1-203ENST00000398137 FIG4Q92562 907 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms