RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 TRAM2Q15035 370 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 MLC1Q15049 377 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 FAM74A3Q4VXF1 159 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 AADACL4Q5VUY2 407 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 BTN2A1Q7KYR7 527 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 BEST4Q8NFU0 473 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 OR5K2Q8NHB8 316 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 PIGXQ8TBF5 258 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 SP7Q8TDD2 431 aaPredicted RBP14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 RFKQ969G6 155 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 ELMOD3Q96FG2 381 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 FCRL4Q96PJ5 515 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 SLC38A3Q99624 504 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 BTBD1Q9H0C5 482 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 ESRP2Q9H6T0 727 aaKnown RBP14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 ISG20L2Q9H9L3 353 aaKnown RBP14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 PTGFRNQ9P2B2 879 aa14.86□□□□□ -0.03
CHMP1A-201ENST00000397901 MYO7AQ13402 2215 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 MYO10Q9HD67 2058 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 A0A1W2PPV9 198 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 PIP5K1CO60331 668 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 ALDOBP05062 364 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 CXCL2P19875 107 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 RAB8AP61006 207 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 SLC36A2Q495M3 483 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 EOGTQ5NDL2 527 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 B3GNTL1Q67FW5 361 aaPredicted RBP14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 RTL10Q7L3V2 364 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 NR2C2APQ86WQ0 139 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 GPR135Q8IZ08 494 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 ZFPM2Q8WW38 1151 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 ARMC5Q96C12 935 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 MRPS24Q96EL2 167 aaKnown RBP14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 TBX5Q99593 518 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 ZNF649Q9BS31 505 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 XKR8Q9H6D3 395 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 CBLCQ9ULV8 474 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 ZFR2Q9UPR6 939 aaKnown RBP14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 A0A0G2JPF8 293 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 PLSCR5A0PG75 271 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 HNRNPCL3B7ZW38 293 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 D6RAR5 112 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 MAN2B1O00754 1011 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 CHST10O43529 356 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 PRNPP04156 253 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 HNRNPCL4P0DMR1 293 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 POU3F2P20265 443 aaPredicted RBP14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 ACSL1P33121 698 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 CTNNB1P35222 781 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 CSNK1G2P78368 415 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 NRMQ8IXM6 262 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 ZNF687Q8N1G0 1237 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 SIRT6Q8N6T7 355 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 LINC01555Q8NAE3 123 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 OR51G2Q8NGK0 314 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 RPLP0P6Q8NHW5 317 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 SPPL3Q8TCT6 385 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 ING5Q8WYH8 240 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 DIO2Q92813 273 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 NXPE3Q969Y0 559 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 LRRC46Q96FV0 321 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 C12orf66Q96MD2 445 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 PLCL2Q9UPR0 1127 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 TMEM5Q9Y2B1 443 aa14.85□□□□□ -0.03
CHMP1A-201ENST00000397901 ZC3H12DA2A288 527 aaKnown RBP14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 GSAPA4D1B5 854 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 POM121CA8CG34 1229 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 LINC00587B1AMM8 73 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 C4orf51C9J302 202 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 VEGFDO43915 354 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 S100A6P06703 90 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 ERGP11308 486 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 ADRB3P13945 408 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 MAZP56270 477 aaKnown RBP14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 ZNF697Q5TEC3 545 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 ZNF322Q6U7Q0 402 aaPredicted RBP14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 SEZ6L2Q6UXD5 910 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 OAFQ86UD1 273 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 PAQR7Q86WK9 346 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 TOMM5Q8N4H5 51 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 ZNF454Q8N9F8 522 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 ZNF784Q8NCA9 323 aaPredicted RBP14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 OR56B4Q8NH76 319 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 NSMAFQ92636 917 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 CNRIP1Q96F85 164 aaPredicted RBP14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 MENTQ9BUN1 341 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 BIN3Q9NQY0 253 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 MARK1Q9P0L2 795 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 GPR160Q9UJ42 338 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 ATG4BQ9Y4P1 393 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 NUMA1Q14980 2115 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 LRIT2A6NDA9 550 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 ST3GAL3Q11203 375 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 PGGHGQ32M88 737 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 FNDC3BQ53EP0 1204 aaKnown RBP14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 C9orf64Q5T6V5 341 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 PYHIN1Q6K0P9 492 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 CPOQ8IVL8 374 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 PDZD9Q8IXQ8 264 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 CMIPQ8IY22 773 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms