RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 SWT1Q5T5J6 900 aaKnown RBP7.65□□□□□ -1.19
PTPRD-204ENST00000397606 FCRLBQ6BAA4 426 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 MRM1Q6IN84 353 aaKnown RBP7.65□□□□□ -1.19
PTPRD-204ENST00000397606 LEG1Q6P5S2 330 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 OR8H2Q8N162 312 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 ZNF433Q8N7K0 673 aaPredicted RBP7.65□□□□□ -1.19
PTPRD-204ENST00000397606 THAP4Q8WY91 577 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 THRSPQ92748 146 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 ABTB1Q969K4 478 aaPredicted RBP7.65□□□□□ -1.19
PTPRD-204ENST00000397606 SARGQ9BW04 601 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 GPR87Q9BY21 358 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 KLF13Q9Y2Y9 288 aaPredicted RBP7.65□□□□□ -1.19
PTPRD-204ENST00000397606 NOX1Q9Y5S8 564 aa7.65□□□□□ -1.19
PTPRD-204ENST00000397606 G3V3Y1 287 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 J3KTA2 159 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 SUSD5O60279 629 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 TNFRSF21O75509 655 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 PPP1R3DO95685 299 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 ACP2P11117 423 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 DRD5P21918 477 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 CD82P27701 267 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 CRABP1P29762 137 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 EIF1AXP47813 144 aaKnown RBP7.64□□□□□ -1.19
PTPRD-204ENST00000397606 PCBP4P57723 403 aaKnown RBP7.64□□□□□ -1.19
PTPRD-204ENST00000397606 TUBA4AP68366 448 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 RASGEF1BQ0VAM2 473 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 ST3GAL4Q11206 333 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 KEAP1Q14145 624 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 GFOD2Q3B7J2 385 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 TMEM176BQ3YBM2 270 aaPredicted RBP7.64□□□□□ -1.19
PTPRD-204ENST00000397606 GPR139Q6DWJ6 353 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 ZNF773Q6PK81 442 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 XKR5Q6UX68 686 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 MARVELD2Q8N4S9 558 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 OR5W2Q8NH69 310 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 CNOT9Q92600 299 aaKnown RBP7.64□□□□□ -1.19
PTPRD-204ENST00000397606 TCF7L1Q9HCS4 588 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 P4HTMQ9NXG6 502 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 ANKRD10Q9NXR5 420 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 EMC3Q9P0I2 261 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 CCL27Q9Y4X3 112 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 B3GALT1Q9Y5Z6 326 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 SEC16AO15027 2179 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 FCMRO60667 390 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 EDNRAP25101 427 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 LSSP48449 732 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 BLMHQ13867 455 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 DUSP7Q16829 419 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 HMBOX1Q6NT76 420 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 GRINAQ7Z429 371 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 ERI1Q8IV48 349 aaKnown RBP7.64□□□□□ -1.19
PTPRD-204ENST00000397606 CNIH3Q8TBE1 160 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 SLC25A43Q8WUT9 341 aaPredicted RBP7.64□□□□□ -1.19
PTPRD-204ENST00000397606 SLC29A1Q99808 456 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 MROQ9BYG7 248 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 HDHD2Q9H0R4 259 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 OR52D1Q9H346 318 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 TPK1Q9H3S4 243 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 IKZF5Q9H5V7 419 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 SP140LQ9H930 580 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 IL20RAQ9UHF4 553 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 PCDHGA1Q9Y5H4 931 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 CORINQ9Y5Q5 1042 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 GPC6Q9Y625 555 aaPredicted RBP7.64□□□□□ -1.19
PTPRD-204ENST00000397606 TMED7-TICAM2A0A0A6YYA0 188 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 CENPBD1B2RD01 187 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 MKRN2OSH3BPM6 223 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 KLK10O43240 276 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 DENRO43583 198 aaKnown RBP7.64□□□□□ -1.19
PTPRD-204ENST00000397606 CHP2O43745 196 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 OR2J2O76002 312 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 RPP14O95059 124 aaKnown RBP7.64□□□□□ -1.19
PTPRD-204ENST00000397606 ACVR1BP36896 505 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 PIGAP37287 484 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 WNT3P56703 355 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 PHC1P78364 1004 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 MRPL49Q13405 166 aaKnown RBP7.64□□□□□ -1.19
PTPRD-204ENST00000397606 QPRTQ15274 297 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 CWF19L1Q69YN2 538 aaKnown RBP7.64□□□□□ -1.19
PTPRD-204ENST00000397606 MBOAT2Q6ZWT7 520 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 OLIG3Q7RTU3 272 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 SLC22A16Q86VW1 577 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 HS3ST5Q8IZT8 346 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 ANKK1Q8NFD2 765 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 OR2Y1Q8NGV0 311 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 RAB2BQ8WUD1 216 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 SECISBP2Q96T21 854 aaKnown RBP7.64□□□□□ -1.19
PTPRD-204ENST00000397606 NUDT9Q9BW91 350 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 BRD7Q9NPI1 651 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 FBXO8Q9NRD0 319 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 NDUFAF4Q9P032 175 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 LRFN1Q9P244 771 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 GNG8Q9UK08 70 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 TMED7Q9Y3B3 224 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 IER3IP1Q9Y5U9 82 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 MN1Q10571 1320 aaPredicted RBP7.64□□□□□ -1.19
PTPRD-204ENST00000397606 UNC13CQ8NB66 2214 aa7.64□□□□□ -1.19
PTPRD-204ENST00000397606 RP1L1Q8IWN7 2480 aaPredicted RBP7.64□□□□□ -1.19
PTPRD-204ENST00000397606 ZNF891A8MT65 544 aaPredicted RBP7.64□□□□□ -1.19
PTPRD-204ENST00000397606 CHRM4P08173 479 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms