RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 PRKAR1BP31321 381 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 MLLT3P42568 568 aaPredicted RBP9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 OR12D2P58182 307 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 PSPHP78330 225 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 MRPL28Q13084 256 aaKnown RBP9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 KCNAB1Q14722 419 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 HYAL4Q2M3T9 481 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 PLK5Q496M5 336 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 C1orf189Q5VU69 101 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 ZNF544Q6NX49 715 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 MCATQ8IVS2 390 aaKnown RBP9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 NRSN2Q9GZP1 204 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 PIGUQ9H490 435 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 CCDC86Q9H6F5 360 aaKnown RBP9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 SRA1Q9HD15 236 aaKnown RBP9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 POLMQ9NP87 494 aaPredicted RBP9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 ADAM18Q9Y3Q7 739 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 SLC22A7Q9Y694 548 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 TANC1Q9C0D5 1861 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 A0A0J9YY10 115 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 A0A1B0GWA3 101 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 ARRDC5A6NEK1 342 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 DYRK3O43781 588 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 GSTT2P0CG29 244 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 GSTT2BP0CG30 244 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 PIPP12273 146 aaPredicted RBP9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 GABRG2P18507 467 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 FRKP42685 505 aaPredicted RBP9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 SOX2P48431 317 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 EMDP50402 254 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 C3orf38Q5JPI3 329 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 DGAT2L6Q6ZPD8 337 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 TP63Q9H3D4 680 aaPredicted RBP9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 Q9N2J8 555 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 TRIM36Q9NQ86 728 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 EVA1BQ9NVM1 165 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 SLCO1B1Q9Y6L6 691 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 SPAG17Q6Q759 2223 aa9.68□□□□□ -0.86
CPSF1P1-201ENST00000397477 SPEGQ15772 3267 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 A0A0B4J203 849 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 OR6C70A6NIJ9 312 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 SURF4O15260 269 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 TBX19O60806 448 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 IFNGP01579 166 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 PRKAR1AP10644 381 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 FPR3P25089 353 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 HTR2AP28223 471 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 ERVK-25P63136 954 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 TMEM53Q6P2H8 277 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 CCDC190Q86UF4 302 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 ABCA7Q8IZY2 2146 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 SLC25A46Q96AG3 418 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 COQ7Q99807 217 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 LRIT1Q9P2V4 623 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 KLF15Q9UIH9 416 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 MDC1Q14676 2089 aaKnown RBP9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 DSPPQ9NZW4 1301 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 MEIOCA2RUB1 952 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 H7C1C5 153 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 SYT5O00445 386 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 EEF1E1O43324 174 aaKnown RBP9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 KCNJ13O60928 360 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 CPNE3O75131 537 aaKnown RBP9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 TP53P04637 393 aaPredicted RBP9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 OR10A3P58181 314 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 LCN6P62502 163 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 FOXK2Q01167 660 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 MLC1Q15049 377 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 DECR1Q16698 335 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 WDR88Q6ZMY6 472 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 KIAA1958Q8N8K9 716 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 MKKSQ9NPJ1 570 aaPredicted RBP9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 ANKRD61A6NGH8 418 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 C11orf98E9PRG8 122 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 APBB3O95704 486 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 THY1P04216 161 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 EDNRAP25101 427 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 RPS27P42677 84 aaKnown RBP9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 HLA-DQA1Q5Y7H0 255 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 LYPD4Q6UWN0 246 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 OR5W2Q8NH69 310 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 SMPDL3BQ92485 455 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 FRMD6Q96NE9 622 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 BRD7Q9NPI1 651 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 PAQR5Q9NXK6 330 aaPredicted RBP9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 DHCR7Q9UBM7 475 aaKnown RBP9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 ADAM30Q9UKF2 790 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 C19orf53Q9UNZ5 99 aaPredicted RBP9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 CHST2Q9Y4C5 530 aa9.67□□□□□ -0.86
CPSF1P1-201ENST00000397477 ELOA3DA6NLF2 546 aaPredicted RBP9.66□□□□□ -0.86
CPSF1P1-201ENST00000397477 E9PI62 339 aa9.66□□□□□ -0.86
CPSF1P1-201ENST00000397477 PRICKLE3O43900 615 aaPredicted RBP9.66□□□□□ -0.86
CPSF1P1-201ENST00000397477 RAD1O60671 282 aa9.66□□□□□ -0.86
CPSF1P1-201ENST00000397477 MT-ND5P03915 603 aa9.66□□□□□ -0.86
CPSF1P1-201ENST00000397477 NID1P14543 1247 aa9.66□□□□□ -0.86
CPSF1P1-201ENST00000397477 SNRPD2P62316 118 aaKnown RBP9.66□□□□□ -0.86
CPSF1P1-201ENST00000397477 ELOA3BQ3SY89 546 aa9.66□□□□□ -0.86
CPSF1P1-201ENST00000397477 AGAP6Q5VW22 663 aa9.66□□□□□ -0.86
CPSF1P1-201ENST00000397477 MZT2BQ6NZ67 158 aa9.66□□□□□ -0.86
CPSF1P1-201ENST00000397477 GDPGP1Q6ZNW5 385 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms