RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 MPIP34949 423 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 BCL6P41182 706 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 MC3RP41968 323 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 TSFMP43897 325 aaKnown RBP12.36□□□□□ -0.43
TRIM40-207ENST00000396581 ZNF136P52737 540 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 PDX1P52945 283 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 E2F1Q01094 437 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 TAGLNQ01995 201 aaKnown RBP12.36□□□□□ -0.43
TRIM40-207ENST00000396581 KLF9Q13886 244 aaPredicted RBP12.36□□□□□ -0.43
TRIM40-207ENST00000396581 ST3GAL2Q16842 350 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 ARL9Q6T311 187 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 BAIAP2L2Q6UXY1 529 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 CEACAM19Q7Z692 300 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 RNF113BQ8IZP6 322 aaKnown RBP12.36□□□□□ -0.43
TRIM40-207ENST00000396581 SLC44A3Q8N4M1 653 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 NXPE2Q96DL1 559 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 SLC35A4Q96G79 324 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 CLDND1Q9NY35 253 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 ABRACLQ9P1F3 81 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 SLC7A7Q9UM01 511 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 TMEM5Q9Y2B1 443 aa12.36□□□□□ -0.43
TRIM40-207ENST00000396581 MUC22E2RYF6 1773 aaPredicted RBP12.35□□□□□ -0.43
TRIM40-207ENST00000396581 TUBAL3A6NHL2 446 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 UNC119BA6NIH7 251 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 SLC22A31A6NKX4 558 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 H2AFB2P0C5Z0 115 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 RRASP10301 218 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 SAGP10523 405 aaPredicted RBP12.35□□□□□ -0.43
TRIM40-207ENST00000396581 ENPP2Q13822 863 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 PUS10Q3MIT2 529 aaKnown RBP12.35□□□□□ -0.43
TRIM40-207ENST00000396581 SLC22A10Q63ZE4 541 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 NUDT18Q6ZVK8 323 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 C16orf62Q7Z3J2 963 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 FAM20CQ8IXL6 584 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 ZNF687Q8N1G0 1237 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 PIAS4Q8N2W9 510 aaPredicted RBP12.35□□□□□ -0.43
TRIM40-207ENST00000396581 DTX3Q8N9I9 347 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 FAM98AQ8NCA5 519 aaKnown RBP12.35□□□□□ -0.43
TRIM40-207ENST00000396581 SMRP1Q8NCR6 262 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 OR2L5Q8NG80 312 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 OR56B4Q8NH76 319 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 ZFPM2Q8WW38 1151 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 SUSD6Q92537 303 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 PTP4A1Q93096 173 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 MS4A3Q96HJ5 214 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 ART5Q96L15 291 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 CMTM3Q96MX0 182 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 RBP7Q96R05 134 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 HCAR1Q9BXC0 346 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 C1QTNF7Q9BXJ2 289 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 PRO3102Q9H379 93 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 CMC2Q9NRP2 79 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 SIDT1Q9NXL6 827 aaKnown RBP12.35□□□□□ -0.43
TRIM40-207ENST00000396581 HAO2Q9NYQ3 351 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 FKBP7Q9Y680 259 aa12.35□□□□□ -0.43
TRIM40-207ENST00000396581 LOC105369274A0A096LPK9 316 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 ZC3H12DA2A288 527 aaKnown RBP12.34□□□□□ -0.43
TRIM40-207ENST00000396581 DUXAA6NLW8 204 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 ZNF593O00488 134 aaPredicted RBP12.34□□□□□ -0.43
TRIM40-207ENST00000396581 BET1O15155 118 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 OR7A10O76100 309 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 CD3GP09693 182 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 ZNF250P15622 560 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 RAB3BP20337 219 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 SLC2A5P22732 501 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 DNASE1P24855 282 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 ZP1P60852 638 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 ZNF85Q03923 595 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 PUDPQ08623 228 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 AANATQ16613 207 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 C18orf63Q68DL7 685 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 MTSS1LQ765P7 747 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 ASPGQ86U10 573 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 OR4N4Q8N0Y3 316 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 MS4A15Q8N5U1 240 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 C17orf47Q8NEP4 570 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 OR9A2Q8NGT5 310 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 OR51Q1Q8NH59 317 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 GIMAP1Q8WWP7 306 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 LCORQ96JN0 433 aaPredicted RBP12.34□□□□□ -0.43
TRIM40-207ENST00000396581 HS6ST2Q96MM7 605 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 TEAD3Q99594 435 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 MTHFD2LQ9H903 347 aaPredicted RBP12.34□□□□□ -0.43
TRIM40-207ENST00000396581 MED20Q9H944 212 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 PRSS16Q9NQE7 514 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 TM7SF3Q9NS93 570 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 RABL2AQ9UBK7 228 aaPredicted RBP12.34□□□□□ -0.43
TRIM40-207ENST00000396581 UBQLN2Q9UHD9 624 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 RABL2BQ9UNT1 228 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 CAMK2AQ9UQM7 478 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 MTCH2Q9Y6C9 303 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 DENND4AQ7Z401 1863 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 ANTXRLA6NF34 631 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 I3L521 148 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 ZNF749O43361 778 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 ERI3O43414 337 aaKnown RBP12.34□□□□□ -0.43
TRIM40-207ENST00000396581 LYPD3O95274 346 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 ASGR2P07307 311 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 SBK2P0C263 348 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 C8orf89P0DMQ9 161 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms