RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 NELFEP18615 380 aaKnown RBP3.15□□□□□ -1.9
VPS13C-203ENST00000395896 MNX1P50219 401 aaPredicted RBP3.15□□□□□ -1.9
VPS13C-203ENST00000395896 PDX1P52945 283 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 XKR5Q6UX68 686 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 SLC16A11Q8NCK7 471 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 NUBPLQ8TB37 319 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 ASB15Q8WXK1 588 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 PRR11Q96HE9 360 aaPredicted RBP3.15□□□□□ -1.9
VPS13C-203ENST00000395896 SLC29A1Q99808 456 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 OR52D1Q9H346 318 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 TAS2R10Q9NYW0 307 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 NCDNQ9UBB6 729 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 GTF2A1LQ9UNN4 478 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 CCL27Q9Y4X3 112 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 MALRD1Q5VYJ5 2156 aa3.15□□□□□ -1.9
VPS13C-203ENST00000395896 A0A1W2PR48 441 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 FABP12A6NFH5 140 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF860A6NHJ4 632 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 PTTG1O95997 202 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 CDK1P06493 297 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 STARD6P59095 220 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 ISL1P61371 349 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 ASTLQ6HA08 431 aaPredicted RBP3.15□□□□□ -1.91
VPS13C-203ENST00000395896 VASH1Q7L8A9 365 aaPredicted RBP3.15□□□□□ -1.91
VPS13C-203ENST00000395896 KRT77Q7Z794 578 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 GRPEL2Q8TAA5 225 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 CIDECQ96AQ7 238 aaPredicted RBP3.15□□□□□ -1.91
VPS13C-203ENST00000395896 TEX37Q96LM6 180 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 KLHL15Q96M94 604 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 CXorf36Q9H7Y0 433 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 RXFP3Q9NSD7 469 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 HPF1Q9NWY4 346 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 ING4Q9UNL4 249 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 PCDHGA10Q9Y5H3 936 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 CDHR4A6H8M9 788 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 OR6C70A6NIJ9 312 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 EIF1AYO14602 144 aaKnown RBP3.15□□□□□ -1.91
VPS13C-203ENST00000395896 ACP2P11117 423 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 PTBP1P26599 531 aaKnown RBP eCLIP3.15□□□□□ -1.913e-10■■■■■ 45.4
VPS13C-203ENST00000395896 CDKN2CP42773 168 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 EIF1AXP47813 144 aaKnown RBP3.15□□□□□ -1.91
VPS13C-203ENST00000395896 OCLNQ16625 522 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 SLC18B1Q6NT16 456 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 SSX8Q7RTT4 187 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 IZUMO1Q8IYV9 350 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 LSMEM1Q8N8F7 131 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 OR2AJ1Q8NGZ0 328 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 KAT2AQ92830 837 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 ITPKCQ96DU7 683 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 GIMAP5Q96F15 307 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 OR2A5Q96R48 311 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 OR7D2Q96RA2 312 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 MAP3K3Q99759 626 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 SLC23A2Q9UGH3 650 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 KCNG2Q9UJ96 466 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 IDSB3KWA1 339 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 NUP62P37198 522 aaPredicted RBP3.15□□□□□ -1.91
VPS13C-203ENST00000395896 TLE3Q04726 772 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 TBC1D25Q3MII6 688 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 RHBDD2Q6NTF9 364 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 FAHD1Q6P587 224 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 MMP21Q8N119 569 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 LKAAEAR1Q8TD35 194 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 FOXRED1Q96CU9 486 aaPredicted RBP3.15□□□□□ -1.91
VPS13C-203ENST00000395896 TMEM43Q9BTV4 400 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 SLCO5A1Q9H2Y9 848 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 RAB9BQ9NP90 201 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 TMEM131Q92545 1883 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 A0A087WZY1 265 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 C2CD4DB7Z1M9 353 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 HCRTR1O43613 425 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 HTR1AP08908 422 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 JUNBP17275 347 aaPredicted RBP3.15□□□□□ -1.91
VPS13C-203ENST00000395896 CHMP24386 653 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 ADH6P28332 368 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 APOBEC1P41238 236 aaKnown RBP3.15□□□□□ -1.91
VPS13C-203ENST00000395896 SLC1A3P43003 542 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 NFATC3Q12968 1075 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 IL10RAQ13651 578 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 RAB39AQ14964 217 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 TOMM34Q15785 309 aaPredicted RBP3.15□□□□□ -1.91
VPS13C-203ENST00000395896 WDR88Q6ZMY6 472 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 DPY19L2P2Q6ZN68 376 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 DNAJC22Q8N4W6 341 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 OR6T1Q8NGN1 323 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 DIO2Q92813 273 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 TM9SF2Q99805 663 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF350Q9GZX5 532 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 WDR54Q9H977 334 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 SLC25A37Q9NYZ2 338 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 EME2A4GXA9 379 aaPredicted RBP3.15□□□□□ -1.91
VPS13C-203ENST00000395896 RNF13O43567 381 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 TPST2O60704 377 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 CDC123O75794 336 aaPredicted RBP3.15□□□□□ -1.91
VPS13C-203ENST00000395896 DIRAS1O95057 198 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 POLR2HP52434 150 aaKnown RBP3.15□□□□□ -1.91
VPS13C-203ENST00000395896 PCBP4P57723 403 aaKnown RBP3.15□□□□□ -1.91
VPS13C-203ENST00000395896 RTL6Q6ICC9 239 aa3.15□□□□□ -1.91
VPS13C-203ENST00000395896 XKRXQ6PP77 449 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms