RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 AKT2P31751 481 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 SLC25A35Q3KQZ1 300 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 GXYLT1Q4G148 440 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 NOXA1Q86UR1 476 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 C19orf18Q8NEA5 215 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 LILRB4Q8NHJ6 448 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 RFKQ969G6 155 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 GAL3ST3Q96A11 431 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 MOAP1Q96BY2 351 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 SNX18Q96RF0 628 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 SLX1AQ9BQ83 275 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 LRRN3Q9H3W5 708 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 IL21RQ9HBE5 538 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 MAT2BQ9NZL9 334 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 EXTL2Q9UBQ6 330 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 A6NCN8 305 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 OR6C74A6NCV1 312 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 LYRM1O43325 122 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 HLA-DPB1P04440 258 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 CPMP14384 443 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 NT5EP21589 574 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 ALAS2P22557 587 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 RPS5P46782 204 aaKnown RBP12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 SRP9P49458 86 aaKnown RBP12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 OR12D2P58182 307 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 SHC2P98077 582 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 ARHGAP11BQ3KRB8 267 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 DCST2Q5T1A1 773 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 PRAMEF8Q5VWM4 474 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 PRAMEF7Q5VXH5 474 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 ZNF57Q68EA5 555 aaPredicted RBP12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 PLET1Q6UQ28 207 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 LYPD8Q6UX82 237 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 SLC37A3Q8NCC5 494 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 OR4M1Q8NGD0 313 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 OR4N2Q8NGD1 307 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 AP3S1Q92572 193 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 CNOT9Q92600 299 aaKnown RBP12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 ORAI1Q96D31 301 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 SARGQ9BW04 601 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 IFT27Q9BW83 186 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 ISYNA1Q9NPH2 558 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 DAPP1Q9UN19 280 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 SLCO1B1Q9Y6L6 691 aa12.48□□□□□ -0.41
GTF2F1-201ENST00000394456 IGHV4-34P06331 123 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 NGFRP08138 427 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 UGT2B7P16662 529 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 NDUFS1P28331 727 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 NDUFAF6Q330K2 333 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 TMEM239Q8WW34 195 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 TMEM43Q9BTV4 400 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 TRPV5Q9NQA5 729 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 CALML5Q9NZT1 146 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 FAM240BA0A1B0GVZ2 78 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 J3QLW9 94 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 HRKO00198 91 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 CPNE3O75131 537 aaKnown RBP12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 PPP1R3DO95685 299 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 SAGP10523 405 aaPredicted RBP12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 ZNF19P17023 458 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 EVI2BP34910 448 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 RGS1Q08116 209 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 CRMP1Q14194 572 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 DEFB110Q30KQ9 67 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 FHL5Q5TD97 284 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 ESPNLQ6ZVH7 1005 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 TRILQ7L0X0 811 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 FAM160A2Q8N612 972 aaPredicted RBP12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 ACBD7Q8N6N7 88 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 SRFBP1Q8NEF9 429 aaKnown RBP12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 OR5J2Q8NH18 312 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 TOE1Q96GM8 510 aaKnown RBP12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 FN3KQ9H479 309 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 MCUBQ9NWR8 336 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 LYARQ9NX58 379 aaKnown RBP12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 ITGB1BP2Q9UKP3 347 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 PCOLCE2Q9UKZ9 415 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 RASD1Q9Y272 281 aa12.47□□□□□ -0.41
GTF2F1-201ENST00000394456 DAPL1A0PJW8 107 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 FAM172BPA6NC97 362 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 C4orf47A7E2U8 309 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 GABRA3P34903 492 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 THBS2P35442 1172 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 ILF3Q12906 894 aaKnown RBP eCLIP12.46□□□□□ -0.415e-6■■■■□ 20
GTF2F1-201ENST00000394456 DUSP8Q13202 625 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 NNATQ16517 81 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 LYPD4Q6UWN0 246 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 MEPCEQ7L2J0 689 aaKnown RBP12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 OR4D9Q8NGE8 314 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 OR52N1Q8NH53 320 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 RLN3Q8WXF3 142 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 HS6ST2Q96MM7 605 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 ZNF350Q9GZX5 532 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 TTYH1Q9H313 450 aaPredicted RBP12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 RBFOX1Q9NWB1 397 aaKnown RBP12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 BABAM2Q9NXR7 383 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 NLGN3Q9NZ94 848 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 FLRT3Q9NZU0 649 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 A0A087WV48 116 aa12.46□□□□□ -0.41
GTF2F1-201ENST00000394456 TRAPPC13A5PLN9 417 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms