RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 CARTPTQ16568 116 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 OCLNQ16625 522 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 CT45A2Q5DJT8 189 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 TCTE1Q5JU00 501 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 CXXC5Q7LFL8 322 aaKnown RBP10.27□□□□□ -0.76
TCOF1-203ENST00000394269 CAMKK1Q8N5S9 505 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 NANOGP1Q8N7R0 232 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 BCORP1Q8N888 145 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 OR1L3Q8NH93 324 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 HS6ST2Q96MM7 605 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 VSTM2LQ96N03 204 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 MESP1Q9BRJ9 268 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 HCAR1Q9BXC0 346 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 MEPEQ9NQ76 525 aaPredicted RBP10.27□□□□□ -0.76
TCOF1-203ENST00000394269 IL20Q9NYY1 176 aa10.27□□□□□ -0.76
TCOF1-203ENST00000394269 PIEZO1Q92508 2521 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 DSCR3O14972 297 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 ZNF749O43361 778 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 DUX1O43812 170 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 PEX14O75381 377 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 SOX30O94993 753 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 CDRT1O95170 752 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 SOX6P35712 828 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 ARRB1P49407 418 aaPredicted RBP10.27□□□□□ -0.77
TCOF1-203ENST00000394269 STARD6P59095 220 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 TIMM50Q3ZCQ8 353 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 WDR45BQ5MNZ6 344 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 CD300LDQ6UXZ3 194 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 PLXDC1Q8IUK5 500 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 FGF21Q9NSA1 209 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 SSR3Q9UNL2 185 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 KLK4Q9Y5K2 254 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 CDH10Q9Y6N8 788 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 SPTAN1Q13813 2472 aaKnown RBP10.27□□□□□ -0.77
TCOF1-203ENST00000394269 LILRA5A6NI73 299 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 BLOC1S5-TXNDC5H3BN57 136 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 SURF4O15260 269 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 ZGLP1P0C6A0 271 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 RPS19P39019 145 aaKnown RBP10.27□□□□□ -0.77
TCOF1-203ENST00000394269 NLGN4YQ8NFZ3 816 aaPredicted RBP10.27□□□□□ -0.77
TCOF1-203ENST00000394269 OR4K13Q8NH42 304 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 OR4C6Q8NH72 309 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 NXF5Q9H1B4 397 aaKnown RBP10.27□□□□□ -0.77
TCOF1-203ENST00000394269 TNFRSF10DQ9UBN6 386 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 ZNF229Q9UJW7 825 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 OSGIN1Q9UJX0 560 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 SATB2Q9UPW6 733 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 NCOR2Q9Y618 2525 aa10.27□□□□□ -0.77
TCOF1-203ENST00000394269 FAM171A2A8MVW0 826 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 SCG5P05408 212 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 CLEC2LP0C7M8 214 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 AZGP1P25311 298 aaKnown RBP10.26□□□□□ -0.77
TCOF1-203ENST00000394269 PLAURQ03405 335 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 HLA-DQA1Q5Y7H0 255 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 ZCCHC12Q6PEW1 402 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 KIRREL2Q6UWL6 708 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 C16orf47Q6ZP98 133 aaPredicted RBP10.26□□□□□ -0.77
TCOF1-203ENST00000394269 KLBQ86Z14 1044 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 PHC2Q8IXK0 858 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 SYT14Q8NB59 555 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 FAM98AQ8NCA5 519 aaKnown RBP10.26□□□□□ -0.77
TCOF1-203ENST00000394269 PROKR2Q8NFJ6 384 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 TM9SF4Q92544 642 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 CDADC1Q9BWV3 514 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 SERTAD3Q9UJW9 196 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 CEP295Q9C0D2 2601 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 MAGEB4O15481 346 aaPredicted RBP10.26□□□□□ -0.77
TCOF1-203ENST00000394269 DYRK3O43781 588 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 GPR3P46089 330 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 NR0B1P51843 470 aaKnown RBP10.26□□□□□ -0.77
TCOF1-203ENST00000394269 HCCSP53701 268 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 DAB2P98082 770 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 IFITM3Q01628 133 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 OR5M10Q6IEU7 315 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 CBLN3Q6UW01 205 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 ATCAYQ86WG3 371 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 HTRA1Q92743 480 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 RFKQ969G6 155 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 GUCD1Q96NT3 240 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 ERMAPQ96PL5 475 aaPredicted RBP10.26□□□□□ -0.77
TCOF1-203ENST00000394269 WDR12Q9GZL7 423 aaKnown RBP10.26□□□□□ -0.77
TCOF1-203ENST00000394269 CHRDQ9H2X0 955 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.26□□□□□ -0.77
TCOF1-203ENST00000394269 QPCTLQ9NXS2 382 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 AK1P00568 194 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 NGFRP08138 427 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 TCEA1P23193 301 aaKnown RBP10.26□□□□□ -0.77
TCOF1-203ENST00000394269 CSF2RBP32927 897 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 RPS25P62851 125 aaKnown RBP10.26□□□□□ -0.77
TCOF1-203ENST00000394269 TUBA1BP68363 451 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 TUBA1AQ71U36 451 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 ZNF563Q8TA94 476 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 ATOH1Q92858 354 aaPredicted RBP10.26□□□□□ -0.77
TCOF1-203ENST00000394269 PMEPA1Q969W9 287 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 CCDC74AQ96AQ1 378 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 KLHL1Q9NR64 748 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 DNAJB12Q9NXW2 375 aaKnown RBP10.26□□□□□ -0.77
TCOF1-203ENST00000394269 DIMT1Q9UNQ2 313 aaKnown RBP10.26□□□□□ -0.77
TCOF1-203ENST00000394269 ADAM18Q9Y3Q7 739 aa10.26□□□□□ -0.77
TCOF1-203ENST00000394269 HMGN1P05114 100 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms