RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 CCL2P13500 99 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 STOMP27105 288 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 AHRP35869 848 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 BDKRB1P46663 353 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 RGRP47804 291 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 ACADVLP49748 655 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 AP1S2P56377 157 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 NUP107P57740 925 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 MYL7Q01449 175 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 STX4Q12846 297 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 KRR1Q13601 381 aaKnown RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 CRMP1Q14194 572 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 ZNF776Q68DI1 518 aaPredicted RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 TMEM220Q6QAJ8 160 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 DHRS11Q6UWP2 260 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.23□□□□□ -1.89
XRN1-202ENST00000392981 UNC93AQ86WB7 457 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 GCSAMQ8N6F7 178 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 PIGCQ92535 297 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 JSRP1Q96MG2 331 aaPredicted RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 CABLES2Q9BTV7 478 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 NARFLQ9H6Q4 476 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 RANBP3Q9H6Z4 567 aaPredicted RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 IL1RL2Q9HB29 575 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 INPP5EQ9NRR6 644 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 ABCD2Q9UBJ2 740 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 STOML2Q9UJZ1 356 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 SNURFLB1AK76 121 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 UNC13BO14795 1591 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 MID1O15344 667 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 PPIHO43447 177 aaKnown RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 CTAG2O75638 210 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 NOL4O94818 638 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 TTC4O95801 387 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 WNT1P04628 370 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 BCL3P20749 454 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 ACO1P21399 889 aaKnown RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 IL32P24001 234 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 GRIA3P42263 894 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 CBX5P45973 191 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 ATP5J2P56134 94 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 EEF1A1P68104 462 aaKnown RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 GUCY2DQ02846 1103 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 MST1RQ04912 1400 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 FAM27E3Q08E93 113 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 TRAF3Q13114 568 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 SPCS2Q15005 226 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 GPRC6AQ5T6X5 926 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 NT5DC1Q5TFE4 455 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 EEF1A1P5Q5VTE0 462 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 ANKRD54Q6NXT1 300 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 FAM171BQ6P995 826 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 DUX4L9Q6RFH8 374 aaPredicted RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 CTU1Q7Z7A3 348 aaKnown RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 FGFRL1Q8N441 504 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 OR2T33Q8NG76 320 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 MARCH1Q8TCQ1 289 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 IL12RB2Q99665 862 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 RHNO1Q9BSD3 238 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 OR2S2Q9NQN1 319 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 ING1Q9UK53 422 aaPredicted RBP3.23□□□□□ -1.89
XRN1-202ENST00000392981 EMCNQ9ULC0 261 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 CFL2Q9Y281 166 aa3.23□□□□□ -1.89
XRN1-202ENST00000392981 WDR27A2RRH5 827 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 LINC01553A4QN01 128 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 I3L4J1 428 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 RPP14O95059 124 aaKnown RBP3.22□□□□□ -1.89
XRN1-202ENST00000392981 GP9P14770 177 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 ZNF23P17027 643 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 C4BPBP20851 252 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 KDELR2P33947 212 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 CX3CR1P49238 355 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 PRELPP51888 382 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 KYAT1Q16773 422 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 CPEB2Q7Z5Q1 589 aaKnown RBP3.22□□□□□ -1.89
XRN1-202ENST00000392981 ODF3L1Q8IXM7 274 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 CYP4Z2PQ8N1L4 340 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 CRIPAKQ8N1N5 446 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 SLC37A3Q8NCC5 494 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 OR2G2Q8NGZ5 317 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 MAGEE2Q8TD90 523 aaPredicted RBP3.22□□□□□ -1.89
XRN1-202ENST00000392981 BOD1Q96IK1 185 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 TPK1Q9H3S4 243 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 C12orf10Q9HB07 376 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 PLEKHA3Q9HB20 300 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 IFT46Q9NQC8 304 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 CUTCQ9NTM9 273 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 MRPL39Q9NYK5 338 aaKnown RBP3.22□□□□□ -1.89
XRN1-202ENST00000392981 SPATA2Q9UM82 520 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 KCNIP3Q9Y2W7 256 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.22□□□□□ -1.89
XRN1-202ENST00000392981 ORC6Q9Y5N6 252 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 IFT140Q96RY7 1462 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 ERBINQ96RT1 1412 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 OR5K3A6NET4 321 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 FURINP09958 794 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 MPLP40238 635 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 THEM4Q5T1C6 240 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 LPCAT4Q643R3 524 aa3.22□□□□□ -1.89
XRN1-202ENST00000392981 FRG2Q64ET8 278 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms