RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 CRB3Q9BUF7 120 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 PRRG3Q9BZD7 231 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 AMBNQ9NP70 447 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 ACOT13Q9NPJ3 140 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 C20orf141Q9NUB4 165 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 TBC1D23Q9NUY8 699 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 PTTG2Q9NZH5 202 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 C19orf25Q9UFG5 118 aaPredicted RBP10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 EXPH5Q8NEV8 1989 aa10.51□□□□□ -0.73
SMARCAL1-203ENST00000392128 A0A1W2PQD3 144 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 CDC14CA4D256 554 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 UNC119BA6NIH7 251 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 PRKYO43930 277 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 ICOSLGO75144 302 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 ENTPD6O75354 484 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 KLK3P07288 261 aaPredicted RBP10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 ZNF806P0C7X5 589 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 PIPP12273 146 aaPredicted RBP10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 IFI30P13284 250 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 ABCD3P28288 659 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 SLC15A1P46059 708 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 NUBP1P53384 320 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 COPZ1P61923 177 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 MEDAGQ5VYS4 303 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 PAPD4Q6PIY7 484 aaKnown RBP10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 APOOLQ6UXV4 268 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 HSDL2Q6YN16 418 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 CDK20Q8IZL9 346 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 CADM2Q8N3J6 435 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 NUBPLQ8TB37 319 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 PHOSPHO1Q8TCT1 267 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 BRIX1Q8TDN6 353 aaKnown RBP10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 RORBQ92753 470 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 BPIFA2Q96DR5 249 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 VMP1Q96GC9 406 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 LPAR4Q99677 370 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 CMKLR1Q99788 373 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 DPH1Q9BZG8 443 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 MEPEQ9NQ76 525 aaPredicted RBP10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 GPR83Q9NYM4 423 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 SELENONQ9NZV5 590 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 AKAP7Q9P0M2 348 aaPredicted RBP10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 RPS6KB2Q9UBS0 482 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 ZNF264O43296 627 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 INMTO95050 263 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 FADS2O95864 444 aaKnown RBP10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 MAKP20794 623 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 ACVR2AP27037 513 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 MAP2K4P45985 399 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 GP2P55259 537 aaKnown RBP10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 TBCEQ15813 527 aaPredicted RBP10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 SYT6Q5T7P8 510 aaPredicted RBP10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 GPR107Q5VW38 600 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 RPL13AP3Q6NVV1 102 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 ZNF517Q6ZMY9 492 aaPredicted RBP10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 NAXDQ8IW45 347 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 OR8K3Q8NH51 312 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 C17orf50Q8WW18 174 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 FCGR1BQ92637 280 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 SLC38A2Q96QD8 506 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 CCNL2Q96S94 520 aaPredicted RBP10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 TSSK6Q9BXA6 273 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 TEX12Q9BXU0 123 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 AKIRIN1Q9H9L7 192 aaPredicted RBP10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 SLC39A1Q9NY26 324 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 KIF26BQ2KJY2 2108 aa10.5□□□□□ -0.73
SMARCAL1-203ENST00000392128 ALG1L2C9J202 215 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 TLX2O43763 284 aaPredicted RBP10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 ENDOUP21128 410 aaKnown RBP10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 PTNP21246 168 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 C21orf33P30042 268 aaPredicted RBP10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 TMBIM6P55061 237 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 NRG3P56975 720 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 ST3GAL4Q11206 333 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 SNAPC1Q16533 368 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 UBE2UQ5VVX9 321 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 STX19Q8N4C7 294 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 GATSQ8NAP1 163 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 TMEM163Q8TC26 289 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 PMEPA1Q969W9 287 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 MESP1Q9BRJ9 268 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 ULBP3Q9BZM4 244 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 LAT2Q9GZY6 243 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 ATP13A2Q9NQ11 1180 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 DNAJC27Q9NZQ0 273 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 GPN3Q9UHW5 284 aaPredicted RBP10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 A0A087WUJ7 227 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 OR6C70A6NIJ9 312 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 GTPBP1O00178 669 aaKnown RBP10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 KPNA4O00629 521 aaPredicted RBP10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 CBFA2T3O75081 653 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 RFPL3O75679 317 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 SF3A2Q15428 464 aaKnown RBP10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 PGGHGQ32M88 737 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 SYT14P1Q58G82 188 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 CLEC12AQ5QGZ9 265 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 WBP2NLQ6ICG8 309 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 FAM198BQ6UWH4 519 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 OR2T33Q8NG76 320 aa10.49□□□□□ -0.73
SMARCAL1-203ENST00000392128 OR4Q3Q8NH05 313 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms