RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 MED12Q93074 2177 aa11.4□□□□□ -0.58
GGPS1-203ENST00000391855 CENPVL1A0A0U1RR11 272 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 A0A1W2PNV4 684 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 PRAMEF27A3QJZ7 478 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 AGAP5A6NIR3 686 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 ATP8B1O43520 1251 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 CYP7B1O75881 506 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 DBIP07108 87 aaKnown RBP11.39□□□□□ -0.59
GGPS1-203ENST00000391855 CHRM4P08173 479 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 PABPC4LP0CB38 370 aaKnown RBP11.39□□□□□ -0.59
GGPS1-203ENST00000391855 UBTFL6P0CB48 400 aaPredicted RBP11.39□□□□□ -0.59
GGPS1-203ENST00000391855 BMP2P12643 396 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 UQCRBP14927 111 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 RPS4Y1P22090 263 aaKnown RBP11.39□□□□□ -0.59
GGPS1-203ENST00000391855 UQCRC1P31930 480 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 PGM1P36871 562 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 CRATP43155 626 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 PCYT1AP49585 367 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 DLX5P56178 289 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 KCNJ10P78508 379 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 MAPK14Q16539 360 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 SYPL1Q16563 259 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 NDUFAF6Q330K2 333 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 COX20Q5RI15 118 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 PRAMEF8Q5VWM4 474 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 PRAMEF7Q5VXH5 474 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 SLC2A7Q6PXP3 512 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 FUNDC1Q8IVP5 155 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 GCNT2Q8N0V5 402 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 ANKFN1Q8N957 763 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 OR10D3Q8NH80 312 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 RFWD2Q8NHY2 731 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 FBXO27Q8NI29 283 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 FNDC9Q8TBE3 224 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 TSPEARQ8WU66 669 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 WDR60Q8WVS4 1066 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 FIG4Q92562 907 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 PRRG4Q9BZD6 226 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 PAIP1Q9H074 479 aaKnown RBP11.39□□□□□ -0.59
GGPS1-203ENST00000391855 NPHS2Q9NP85 383 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 SERINC1Q9NRX5 453 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 GLRX2Q9NS18 164 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 SLC6A13Q9NSD5 602 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 CORO2BQ9UQ03 480 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 SPIN1Q9Y657 262 aaPredicted RBP11.39□□□□□ -0.59
GGPS1-203ENST00000391855 GMEB1Q9Y692 573 aa11.39□□□□□ -0.59
GGPS1-203ENST00000391855 UTP20O75691 2785 aaKnown RBP11.39□□□□□ -0.59
GGPS1-203ENST00000391855 KIAA1549Q9HCM3 1950 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 DSPPQ9NZW4 1301 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 UQCRHLA0A096LP55 91 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 A0A1W2PP18 115 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 H0YC42 278 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 CLIC1O00299 241 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 MSTNO14793 375 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 HOXB9P17482 250 aaPredicted RBP11.38□□□□□ -0.59
GGPS1-203ENST00000391855 FKBP2P26885 142 aaKnown RBP11.38□□□□□ -0.59
GGPS1-203ENST00000391855 CPA2P48052 419 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 RNF144AP50876 292 aaPredicted RBP11.38□□□□□ -0.59
GGPS1-203ENST00000391855 TPD52P55327 224 aaPredicted RBP11.38□□□□□ -0.59
GGPS1-203ENST00000391855 LSM11P83369 360 aaKnown RBP eCLIP11.38□□□□□ -0.59
GGPS1-203ENST00000391855 FOXF2Q12947 444 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 CTU2Q2VPK5 515 aaKnown RBP11.38□□□□□ -0.59
GGPS1-203ENST00000391855 GTDC1Q4AE62 458 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 AGKQ53H12 422 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 HBMQ6B0K9 141 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 GTF2IRD2BQ6EKJ0 949 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 C3orf33Q6P1S2 294 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 OLIG3Q7RTU3 272 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 GTF2IRD2Q86UP8 949 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 PEX5LQ8IYB4 626 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 ZNF440Q8IYI8 595 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 ZNF295-AS1Q8N0V1 137 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 LILRA2Q8N149 483 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 SLC25A43Q8WUT9 341 aaPredicted RBP11.38□□□□□ -0.59
GGPS1-203ENST00000391855 CPNE4Q96A23 557 aaPredicted RBP11.38□□□□□ -0.59
GGPS1-203ENST00000391855 ZNF845Q96IR2 970 aaPredicted RBP11.38□□□□□ -0.59
GGPS1-203ENST00000391855 ZNF559Q9BR84 538 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 THUMPD3Q9BV44 507 aaKnown RBP11.38□□□□□ -0.59
GGPS1-203ENST00000391855 ACER3Q9NUN7 267 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 DCTN4Q9UJW0 460 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 PCDHB14Q9Y5E9 798 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 PCNX3Q9H6A9 2034 aa11.38□□□□□ -0.59
GGPS1-203ENST00000391855 A0A0G2JND7 137 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 A0A0J9YW62 118 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 FAAHO00519 579 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 CXCL13O43927 109 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 TNFSF13O75888 250 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 GOSR1O95249 250 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 C1QCP02747 245 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 BCHEP06276 602 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 TFPTP0C1Z6 253 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 ETFAP13804 333 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 PRF1P14222 555 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 NID1P14543 1247 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 IL7RP16871 459 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 NCF2P19878 526 aaPredicted RBP11.37□□□□□ -0.59
GGPS1-203ENST00000391855 CAPN3P20807 821 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 SLC7A1P30825 629 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 TLE4Q04727 773 aa11.37□□□□□ -0.59
GGPS1-203ENST00000391855 MYBPHQ13203 477 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms