RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 IGLV11-55A0A075B6I3 123 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 LOC100131303A0A0U1RQF7 123 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 C7orf66A4D0T2 115 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 SMIM30A4D0T7 59 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 E9PMD0 336 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 SGK494L7N484 410 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 HIP1O00291 1037 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 FAM189A1O60320 539 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 OR10H3O60404 316 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 N4BP1O75113 896 aaKnown RBP0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 AKAP3O75969 853 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 NDUFA7O95182 113 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 RCBTB2O95199 551 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 CTDNEP1O95476 244 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 DCNP07585 359 aaKnown RBP0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 HBQ1P09105 142 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 ANXA4P09525 319 aaPredicted RBP0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 RHOXF2BP0C7M4 288 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 CLUP10909 449 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 ICAM2P13598 275 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 HPGDP15428 266 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 TSPAN8P19075 237 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 DPP4P27487 766 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 PTPN6P29350 595 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 TNNT3P45378 269 aaPredicted RBP0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 GYG1P46976 350 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 NMUP48645 174 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 UBE2AP49459 152 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 STARP49675 285 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 RPL8P62917 257 aaKnown RBP0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 GFPT1Q06210 699 aaPredicted RBP0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 RGS1Q08116 209 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 ST3GAL3Q11203 375 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 PPP2R5CQ13362 524 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 SNX1Q13596 522 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 NDUFA9Q16795 377 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 HFEQ30201 348 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 LRIT3Q3SXY7 679 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 ABCA11PQ4W5N1 156 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 BOLA3Q53S33 107 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 HECTD3Q5T447 861 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 ATF7IP2Q5U623 682 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 LIPKQ5VXJ0 399 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 PVRIGQ6DKI7 326 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 ZSCAN25Q6NSZ9 544 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 TMEM270Q6UE05 265 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 DLEU7Q6UYE1 221 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 C19orf35Q6ZS72 473 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 COX15Q7KZN9 410 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 NEGR1Q7Z3B1 354 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 PCP2Q8IVA1 136 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 ZNF695Q8IW36 515 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 SERPINA12Q8IW75 414 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 MYOCDQ8IZQ8 938 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 BATF2Q8N1L9 274 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 OR51S1Q8NGJ8 323 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 UBALD1Q8TB05 177 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 SYNPRQ8TBG9 265 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 GIPC3Q8TF64 312 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 RAB7BQ96AH8 199 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 UPRTQ96BW1 309 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 RMI2Q96E14 147 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 RNF185Q96GF1 192 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 ZNF560Q96MR9 790 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 JAKMIP1Q96N16 626 aaKnown RBP0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 SLC30A2Q9BRI3 323 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 SPATA16Q9BXB7 569 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 TBC1D10AQ9BXI6 508 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 PLA2G12AQ9BZM1 189 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 SELENOIQ9C0D9 397 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 ATG10Q9H0Y0 220 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 POLR3FQ9H1D9 316 aaPredicted RBP0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 LPAR2Q9HBW0 351 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 TRPV5Q9NQA5 729 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 PAK1IP1Q9NWT1 392 aaPredicted RBP0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 RDH8Q9NYR8 311 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 AIPL1Q9NZN9 384 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 HMG20BQ9P0W2 317 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 CYTH4Q9UIA0 394 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 NPC1L1Q9UHC9 1359 aa0.69□□□□□ -2.3
SNORD28B-201ENST00000390993 IGHV3OR16-13A0A075B7E8 117 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 A0A0G2JLM5 398 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 A0A1B0GWB2 263 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 A0A1W2PRV1 198 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 C5orf51A6NDU8 294 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 ARHGAP42A6NI28 874 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 C17orf51A8MQB3 221 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 WASH3PC4AMC7 463 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 C11orf94C9JXX5 98 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 GFYI3L273 518 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 LGALS8O00214 317 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 FCN1O00602 326 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 VAMP5O95183 116 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 UBTFL1P0CB47 393 aaPredicted RBP0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 RNASE2P10153 161 aaKnown RBP0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 PNMTP11086 282 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 ANXA3P12429 323 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 YWHABP31946 246 aaKnown RBP0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 CASP3P42574 277 aa0.68□□□□□ -2.3
SNORD28B-201ENST00000390993 ASMTP46597 345 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms