RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 SNHG28P0DPA3 235 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 RAP2AP10114 183 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 MYL2P10916 166 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 BMP3P12645 472 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 COX4I1P13073 169 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 GTF2F2P13984 249 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 GYPEP15421 78 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 EPCAMP16422 314 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 ZNF43P17038 809 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 JUNBP17275 347 aaPredicted RBP3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 TCP1P17987 556 aaKnown RBP3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 CSNK2A2P19784 350 aaPredicted RBP3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 KITLGP21583 273 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 TBXA2RP21731 343 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 FBLN1P23142 703 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 ERP29P30040 261 aaKnown RBP3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 PRDX3P30048 256 aaKnown RBP3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 SLC6A1P30531 599 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 SSTR2P30874 369 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 MATKP42679 507 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 GYG1P46976 350 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 RABGGTBP53611 331 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 ATP1B3P54709 279 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 RRADP55042 308 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 CLDN15P56746 228 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 OR4D2P58180 307 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 CDC42P60953 191 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 ESRRGP62508 458 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 KCNJ2P63252 427 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 ELF3P78545 371 aaPredicted RBP3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 MRPS11P82912 194 aaKnown RBP3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 LSM11P83369 360 aaKnown RBP eCLIP3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 SEMG2Q02383 582 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 BAMBIQ13145 260 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 NME3Q13232 169 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 EXOSC2Q13868 293 aaKnown RBP3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 MELKQ14680 651 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 POU6F1Q14863 301 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 RTP5Q14D33 572 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 PTGISQ16647 500 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 HLA-BQ31612 363 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 PGGHGQ32M88 737 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 WDR72Q3MJ13 1102 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 GGTA1PQ4G0N0 100 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 SDHAF4Q5VUM1 108 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 TRIQKQ629K1 86 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 LPCAT4Q643R3 524 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 HIST2H2AA3Q6FI13 130 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 FAM45BPQ6NSW5 357 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 UGT3A1Q6NUS8 523 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 ANKRD16Q6P6B7 361 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 DHRS4L2Q6PKH6 230 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 HACD2Q6Y1H2 254 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 RNF111Q6ZNA4 994 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 ZNF621Q6ZSS3 439 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 TPRG1Q6ZUI0 275 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 C22orf34Q6ZV56 151 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 AHSA2Q719I0 299 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 MEPCEQ7L2J0 689 aaKnown RBP3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 GDPD3Q7L5L3 318 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 TMEM144Q7Z5S9 345 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 CTU1Q7Z7A3 348 aaKnown RBP3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 TMPRSS11BQ86T26 416 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 HAPLN4Q86UW8 402 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 TRAPPC5Q8IUR0 188 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 NRMQ8IXM6 262 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 TMEFF1Q8IYR6 380 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 SPAG16Q8N0X2 631 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 LINC00528Q8N1L1 170 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 MUC20Q8N307 709 aaPredicted RBP3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 GALNT16Q8N428 558 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 FGFRL1Q8N441 504 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 SPEM1Q8N4L4 309 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 CLDN22Q8N7P3 220 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 HSD17B11Q8NBQ5 300 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 OR5L1Q8NGL2 311 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 OR4A4PQ8NGN8 299 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 OR6N2Q8NGY6 317 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 SPATA22Q8NHS9 363 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 WFIKKN2Q8TEU8 576 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 RORBQ92753 470 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 TMEM56Q96MV1 263 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 RNF2Q99496 336 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 SDHCQ99643 169 aaPredicted RBP3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 MDFIQ99750 246 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 CCDC3Q9BQI4 270 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 TIMM29Q9BSF4 260 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 MRI1Q9BV20 369 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 PTDSS2Q9BVG9 487 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 ALG8Q9BVK2 526 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 IFT27Q9BW83 186 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 VN1R3Q9BXE9 311 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 TLNRD1Q9H1K6 362 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 MMP28Q9H239 520 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 TMEM38AQ9H6F2 299 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 ACTR5Q9H9F9 607 aaPredicted RBP3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 EBF2Q9HAK2 575 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 SLC28A3Q9HAS3 691 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 EML4Q9HC35 981 aaKnown RBP3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 Q9N2K0 584 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms