RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 C16orf62Q7Z3J2 963 aa12.14□□□□□ -0.47
TRBV4-1-201ENST00000390357 SPATA19Q7Z5L4 167 aa12.14□□□□□ -0.47
TRBV4-1-201ENST00000390357 CXorf67Q86X51 503 aaPredicted RBP12.14□□□□□ -0.47
TRBV4-1-201ENST00000390357 TRIML2Q8N7C3 387 aa12.14□□□□□ -0.47
TRBV4-1-201ENST00000390357 ZNF614Q8N883 585 aa12.14□□□□□ -0.47
TRBV4-1-201ENST00000390357 OR4A15Q8NGL6 344 aa12.14□□□□□ -0.47
TRBV4-1-201ENST00000390357 OR5AK3PQ8NH89 298 aa12.14□□□□□ -0.47
TRBV4-1-201ENST00000390357 ZFP90Q8TF47 636 aa12.14□□□□□ -0.47
TRBV4-1-201ENST00000390357 C18orf12Q96KH6 178 aa12.14□□□□□ -0.47
TRBV4-1-201ENST00000390357 MARK4Q96L34 752 aa12.14□□□□□ -0.47
TRBV4-1-201ENST00000390357 NPAS1Q99742 590 aa12.14□□□□□ -0.47
TRBV4-1-201ENST00000390357 SAP130Q9H0E3 1048 aa12.14□□□□□ -0.47
TRBV4-1-201ENST00000390357 MEAF6Q9HAF1 191 aa12.14□□□□□ -0.47
TRBV4-1-201ENST00000390357 KCNK9Q9NPC2 374 aa12.14□□□□□ -0.47
TRBV4-1-201ENST00000390357 KLHL9Q9P2J3 617 aa12.14□□□□□ -0.47
TRBV4-1-201ENST00000390357 SLC35A3Q9Y2D2 325 aa12.14□□□□□ -0.47
TRBV4-1-201ENST00000390357 HEATR5AQ86XA9 2040 aa12.14□□□□□ -0.47
TRBV4-1-201ENST00000390357 DSCAMO60469 2012 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 AKAP9Q99996 3911 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 C2CD3Q4AC94 2353 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 RNF103-CHMP3A0A140T963 221 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 KLF4O43474 513 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 EFNA2O43921 213 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 SCN2BO60939 215 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 UGT2B17O75795 530 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 CNOT4O95628 575 aaKnown RBP12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 CSTAP01040 98 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 SLC7A1P30825 629 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 S100A3P33764 101 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 APOBEC1P41238 236 aaKnown RBP12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 MAGEA8P43361 318 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 CLK1P49759 484 aaKnown RBP12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 SLC18A1P54219 525 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 CSNK2A1P68400 391 aaPredicted RBP12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 CASP8Q14790 479 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 QPRTQ15274 297 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 CEP85LQ5SZL2 805 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 PDZK1Q5T2W1 519 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 C3orf33Q6P1S2 294 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 PLEKHM3Q6ZWE6 761 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 ZNF550Q7Z398 422 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 CLECL1Q8IZS7 167 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 OR5D16Q8NGK9 328 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 SLC25A43Q8WUT9 341 aaPredicted RBP12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 XAGE5Q8WWM1 108 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 ROBO4Q8WZ75 1007 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 HSD17B8Q92506 261 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 ZC3HAV1LQ96H79 300 aaKnown RBP12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 PKNOX2Q96KN3 472 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 SORT1Q99523 831 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 THUMPD3Q9BV44 507 aaKnown RBP12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 C20orf27Q9GZN8 174 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 ZNF350Q9GZX5 532 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 OR51I1Q9H343 314 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 TMEM185BQ9H7F4 350 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 BCO1Q9HAY6 547 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 KLHL13Q9P2N7 655 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 BTNL2Q9UIR0 455 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 CLEC4AQ9UMR7 237 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 LIPT1Q9Y234 373 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 WDR45Q9Y484 360 aa12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 SPIN1Q9Y657 262 aaPredicted RBP12.13□□□□□ -0.47
TRBV4-1-201ENST00000390357 NPIPA5A0A0B4J1W7 369 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 TRPC5OSA6NMA1 111 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 ESPNB1AK53 854 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 NPIPA7E9PJI5 369 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 SIAH2O43255 324 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 FCMRO60667 390 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 CPSF4O95639 269 aaKnown RBP12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 FESP07332 822 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 NPIPA8P0DM63 369 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 ENPP1P22413 925 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 CCKARP32238 428 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 MAP2K6P52564 334 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 SFRP5Q5T4F7 317 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 HHATQ5VTY9 493 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 SAXO2Q658L1 398 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 ANKRD34AQ69YU3 496 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 TUSC5Q8IXB3 177 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 CMIPQ8IY22 773 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 TMCO5AQ8N6Q1 288 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 GLB1L3Q8NCI6 653 aaPredicted RBP12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 RFWD2Q8NHY2 731 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 NUDT8Q8WV74 236 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 NEURL3Q96EH8 262 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 CCL19Q99731 98 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 BDH2Q9BUT1 245 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 ACTR6Q9GZN1 396 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 CENPHQ9H3R5 247 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 ACER3Q9NUN7 267 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 THAP1Q9NVV9 213 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 MKLN1Q9UL63 735 aa12.12□□□□□ -0.47
TRBV4-1-201ENST00000390357 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.11□□□□□ -0.47
TRBV4-1-201ENST00000390357 ZNF724A8MTY0 619 aa12.11□□□□□ -0.47
TRBV4-1-201ENST00000390357 E9PBE3 544 aa12.11□□□□□ -0.47
TRBV4-1-201ENST00000390357 DNPH1O43598 174 aa12.11□□□□□ -0.47
TRBV4-1-201ENST00000390357 THBDP07204 575 aa12.11□□□□□ -0.47
TRBV4-1-201ENST00000390357 OR12D1P0DN82 309 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms