RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 SDF4Q9BRK5 362 aa-0.55□□□□□ -2.5
SNORA40-201ENST00000388090 NTMT1Q9BV86 223 aa-0.55□□□□□ -2.5
SNORA40-201ENST00000388090 CCL28Q9NRJ3 127 aa-0.55□□□□□ -2.5
SNORA40-201ENST00000388090 DCAF13Q9NV06 445 aaKnown RBP-0.55□□□□□ -2.5
SNORA40-201ENST00000388090 KIF25Q9UIL4 384 aa-0.55□□□□□ -2.5
SNORA40-201ENST00000388090 MRPS33Q9Y291 106 aaKnown RBP-0.55□□□□□ -2.5
SNORA40-201ENST00000388090 SYNE2Q8WXH0 6885 aaKnown RBP-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 IGHV5-51A0A0C4DH38 117 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 PLAC8L1A1L4L8 177 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 SGK1O00141 431 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 CFLARO15519 480 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 EPB41L2O43491 1005 aaKnown RBP-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 JCHAINP01591 159 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 VIMP08670 466 aaKnown RBP-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 FRKP42685 505 aaPredicted RBP-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 ARHGAP1Q07960 439 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 STX1AQ16623 288 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 CLPPQ16740 277 aaPredicted RBP-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 SLC5A12Q1EHB4 618 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 ALFQ53S48 1182 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 MARCH8Q5T0T0 291 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 PVRIGQ6DKI7 326 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 PNCKQ6P2M8 343 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 PODNL1Q6PEZ8 512 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 SNX32Q86XE0 403 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 IQUBQ8NA54 791 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 ZNF680Q8NEM1 530 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 ARPC1AQ92747 370 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 PKMYT1Q99640 499 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 NAA11Q9BSU3 229 aaPredicted RBP-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 GANQ9H2C0 597 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 RBM28Q9NW13 759 aaKnown RBP-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 PAK1IP1Q9NWT1 392 aaPredicted RBP-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 KLHL28Q9NXS3 571 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 UVRAGQ9P2Y5 699 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 KCNK6Q9Y257 313 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 SIGLEC7Q9Y286 467 aa-0.56□□□□□ -2.5
SNORA40-201ENST00000388090 PASKQ96RG2 1323 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 GPATCH8Q9UKJ3 1502 aaKnown RBP-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 E9PBE3 544 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 EIF5BO60841 1220 aaKnown RBP-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 ADCY5O95622 1261 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 CHRNGP07510 517 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 GSTA1P08263 222 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 NPR2P20594 1047 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 SGSHP51688 502 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 TGFBR3Q03167 851 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 FMODQ06828 376 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 ZNF763Q0D2J5 394 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 COG2Q14746 738 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 IL23RQ5VWK5 629 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 SPATA21Q7Z572 469 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 ASPGQ86U10 573 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 SLC22A16Q86VW1 577 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 IFNEQ86WN2 208 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 AQP12AQ8IXF9 295 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 C4orf19Q8IY42 314 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 ST20-AS1Q8NBB2 130 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 OR5M1Q8NGP8 315 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 P3H4Q92791 437 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 RMDN1Q96DB5 314 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 ZNF607Q96SK3 696 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 DDX50Q9BQ39 737 aaKnown RBP-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 ANKRD2Q9GZV1 360 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 DHX35Q9H5Z1 703 aaKnown RBP-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 SGK2Q9HBY8 427 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 FAM114A2Q9NRY5 505 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 PLLPQ9Y342 182 aa-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 EXOSC1Q9Y3B2 195 aaKnown RBP-0.57□□□□□ -2.5
SNORA40-201ENST00000388090 CENPJQ9HC77 1338 aaPredicted RBP-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 COL4A1P02462 1669 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 IGHV3OR16-13A0A075B7E8 117 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 IGHV3-66A0A0C4DH42 116 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 A0A1B0GUL7 405 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 PPIHO43447 177 aaKnown RBP-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 GLCEO94923 617 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 CCNE2O96020 404 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 P04436 131 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 TCP1P17987 556 aaKnown RBP-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 CCND3P30281 292 aaPredicted RBP-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 GEMP55040 296 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 IFI35P80217 286 aaPredicted RBP-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 HMGCS1Q01581 520 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 KARSQ15046 597 aaKnown RBP-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 ZNF699Q32M78 642 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 C1orf100Q5SVJ3 147 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 TMEM136Q6ZRR5 245 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 C1orf122Q6ZSJ8 110 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 ERN2Q76MJ5 926 aaKnown RBP-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 ADCK2Q7Z695 626 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 CNTN4Q8IWV2 1026 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 KLHDC8AQ8IYD2 350 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 BATF2Q8N1L9 274 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 OR51S1Q8NGJ8 323 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 MCOLN3Q8TDD5 553 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 TRUB1Q8WWH5 349 aaKnown RBP-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 SLC5A11Q8WWX8 675 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 HAS2Q92819 552 aa-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 FRMD8P1Q9BZ68 369 aaPredicted RBP-0.58□□□□□ -2.5
SNORA40-201ENST00000388090 DNTTIP1Q9H147 329 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms