RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 IL15RAQ13261 267 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 RBMY1FQ15415 496 aaKnown RBP0.09□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF699Q32M78 642 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 C1orf141Q5JVX7 400 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 FAM120AOSQ5T036 256 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 OR8G2PQ6IF36 304 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 HCP5Q6MZN7 132 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 CAVIN1Q6NZI2 390 aaKnown RBP0.09□□□□□ -2.4
SNORD28-201ENST00000384706 C1orf94Q6P1W5 598 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 SHQ1Q6PI26 577 aaKnown RBP0.09□□□□□ -2.4
SNORD28-201ENST00000384706 SMARCD3Q6STE5 483 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 BTNL3Q6UXE8 466 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF620Q6ZNG0 422 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 TOM1L2Q6ZVM7 507 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 SLC22A16Q86VW1 577 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 GPBP1Q86WP2 473 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 SNX32Q86XE0 403 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF573Q86YE8 665 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 CCDC83Q8IWF9 413 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF664Q8N3J9 261 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 CHCHD4Q8N4Q1 142 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 MIR7-3HGQ8N6C7 128 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 TMEM104Q8NE00 496 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 OR4A16Q8NH70 328 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 DTX3LQ8TDB6 740 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 ARPC1AQ92747 370 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 P3H4Q92791 437 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 PGLYRP4Q96LB8 373 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 RNF157Q96PX1 679 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 RAB3IPQ96QF0 476 aaPredicted RBP0.09□□□□□ -2.4
SNORD28-201ENST00000384706 PANX3Q96QZ0 392 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 CYP2S1Q96SQ9 504 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 TMEM121Q9BTD3 319 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 SPATA16Q9BXB7 569 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 TEKT3Q9BXF9 490 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 CHMP4AQ9BY43 222 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 CLMPQ9H6B4 373 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 MYH16Q9H6N6 1097 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF355PQ9NSJ1 428 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 STARD5Q9NSY2 213 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 ACOXLQ9NUZ1 547 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF226Q9NYT6 803 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 MBD2Q9UBB5 411 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 GHRLQ9UBU3 117 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 MIOXQ9UGB7 285 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 PCYOX1Q9UHG3 505 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 KIF25Q9UIL4 384 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 APPL1Q9UKG1 709 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 PLA2G4CQ9UP65 541 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 MRPS33Q9Y291 106 aaKnown RBP0.09□□□□□ -2.4
SNORD28-201ENST00000384706 MRPS2Q9Y399 296 aaKnown RBP0.09□□□□□ -2.4
SNORD28-201ENST00000384706 HEBP2Q9Y5Z4 205 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 POMT1Q9Y6A1 747 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 KMT2DO14686 5537 aa0.09□□□□□ -2.4
SNORD28-201ENST00000384706 RP1L1Q8IWN7 2480 aaPredicted RBP0.09□□□□□ -2.4
SNORD28-201ENST00000384706 ZSWIM8A7E2V4 1837 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 CARMIL3Q8ND23 1372 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 CACNA1GO43497 2377 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 C13orf42A0A1B0GVH6 325 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 OOEPA6NGQ2 149 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF850A8MQ14 1090 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 DNASE2O00115 360 aaPredicted RBP0.08□□□□□ -2.4
SNORD28-201ENST00000384706 SGK1O00141 431 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 LGALS9O00182 355 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 SLC30A4O14863 429 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF263O14978 683 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 TM9SF1O15321 606 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 TTI1O43156 1089 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 CHST1O43916 411 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 ATP6V1G1O75348 118 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 STK17BO94768 372 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 SIX3O95343 332 aaPredicted RBP0.08□□□□□ -2.4
SNORD28-201ENST00000384706 SLC16A8O95907 504 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 LALBAP00709 142 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 IGKV1-16P04430 117 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 APRTP07741 180 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 SERPINF2P08697 491 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 SLC35G4P0C7Q5 338 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 TDGF1P13385 188 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 FERP16591 822 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 SERPINA2P20848 420 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 ATP6V1B2P21281 511 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 PAX3P23760 479 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 TMOD1P28289 359 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 TGFBR2P37173 567 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 TNFSF9P41273 254 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF41P51814 821 aaPredicted RBP0.08□□□□□ -2.4
SNORD28-201ENST00000384706 TDGF1P3P51864 188 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 SMSP52788 366 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 PLK1P53350 603 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 RAD23AP54725 363 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 CASP9P55211 416 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 MRPS6P82932 125 aaKnown RBP0.08□□□□□ -2.4
SNORD28-201ENST00000384706 FLI1Q01543 452 aaPredicted RBP0.08□□□□□ -2.4
SNORD28-201ENST00000384706 TNFRSF9Q07011 255 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 SMARCB1Q12824 385 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 SNTB2Q13425 540 aaKnown RBP0.08□□□□□ -2.4
SNORD28-201ENST00000384706 SIM2Q14190 667 aaPredicted RBP0.08□□□□□ -2.4
SNORD28-201ENST00000384706 PARP6Q2NL67 630 aa0.08□□□□□ -2.4
SNORD28-201ENST00000384706 RFX4Q33E94 735 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms