RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 ATG4DQ86TL0 474 aaPredicted RBP12.6□□□□□ -0.39
SHOX-202ENST00000381575 STK32CQ86UX6 486 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 RAB3IL1Q8TBN0 382 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 ZFP90Q8TF47 636 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 S100PBPQ96BU1 408 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 ZNF775Q96BV0 537 aaPredicted RBP12.6□□□□□ -0.39
SHOX-202ENST00000381575 DNAJA3Q96EY1 480 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 SLC35G5Q96KT7 338 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 SDF2Q99470 211 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 PIP5K1AQ99755 562 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 C20orf27Q9GZN8 174 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 HOXD1Q9GZZ0 328 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 HEATR1Q9H583 2144 aaKnown RBP12.6□□□□□ -0.39
SHOX-202ENST00000381575 AKTIPQ9H8T0 292 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 GLRX2Q9NS18 164 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 MKLN1Q9UL63 735 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 DTNAQ9Y4J8 743 aa12.6□□□□□ -0.39
SHOX-202ENST00000381575 FCMRO60667 390 aa12.59□□□□□ -0.39
SHOX-202ENST00000381575 BCAS1O75363 584 aaPredicted RBP12.59□□□□□ -0.39
SHOX-202ENST00000381575 GCM2O75603 506 aaPredicted RBP12.59□□□□□ -0.39
SHOX-202ENST00000381575 H6PDO95479 791 aa12.59□□□□□ -0.39
SHOX-202ENST00000381575 C1QCP02747 245 aa12.59□□□□□ -0.39
SHOX-202ENST00000381575 MATN1P21941 496 aa12.59□□□□□ -0.39
SHOX-202ENST00000381575 EDNRAP25101 427 aa12.59□□□□□ -0.39
SHOX-202ENST00000381575 SLC7A1P30825 629 aa12.59□□□□□ -0.39
SHOX-202ENST00000381575 PTH2RP49190 550 aa12.59□□□□□ -0.39
SHOX-202ENST00000381575 SUMO3P55854 103 aaPredicted RBP12.59□□□□□ -0.39
SHOX-202ENST00000381575 CLDN8P56748 225 aa12.59□□□□□ -0.39
SHOX-202ENST00000381575 EMX2Q04743 252 aa12.59□□□□□ -0.39
SHOX-202ENST00000381575 TMEM201Q5SNT2 666 aa12.59□□□□□ -0.39
SHOX-202ENST00000381575 TNFAIP8L2Q6P589 184 aaPredicted RBP12.59□□□□□ -0.39
SHOX-202ENST00000381575 PLEKHM3Q6ZWE6 761 aa12.59□□□□□ -0.39
SHOX-202ENST00000381575 LRRC75A-AS1Q8N1F1 130 aa12.59□□□□□ -0.39
SHOX-202ENST00000381575 OR4A15Q8NGL6 344 aa12.59□□□□□ -0.39
SHOX-202ENST00000381575 RAB8BQ92930 207 aa12.59□□□□□ -0.39
SHOX-202ENST00000381575 CPNE4Q96A23 557 aaPredicted RBP12.59□□□□□ -0.39
SHOX-202ENST00000381575 MOAP1Q96BY2 351 aa12.59□□□□□ -0.39
SHOX-202ENST00000381575 COX4I2Q96KJ9 171 aa12.59□□□□□ -0.39
SHOX-202ENST00000381575 THUMPD3Q9BV44 507 aaKnown RBP12.59□□□□□ -0.39
SHOX-202ENST00000381575 OR51I1Q9H343 314 aa12.59□□□□□ -0.39
SHOX-202ENST00000381575 NOP53Q9NZM5 478 aaKnown RBP12.59□□□□□ -0.39
SHOX-202ENST00000381575 KLHL13Q9P2N7 655 aa12.59□□□□□ -0.39
SHOX-202ENST00000381575 GPC6Q9Y625 555 aaPredicted RBP12.59□□□□□ -0.39
SHOX-202ENST00000381575 ABCA1O95477 2261 aa12.59□□□□□ -0.39
SHOX-202ENST00000381575 DNHD1Q96M86 4753 aa12.59□□□□□ -0.39
SHOX-202ENST00000381575 SERINC4A6NH21 518 aa12.58□□□□□ -0.4
SHOX-202ENST00000381575 ESPNB1AK53 854 aa12.58□□□□□ -0.4
SHOX-202ENST00000381575 ZNF264O43296 627 aa12.58□□□□□ -0.4
SHOX-202ENST00000381575 CPSF4O95639 269 aaKnown RBP12.58□□□□□ -0.4
SHOX-202ENST00000381575 SERPINE1P05121 402 aa12.58□□□□□ -0.4
SHOX-202ENST00000381575 UBTFL6P0CB48 400 aaPredicted RBP12.58□□□□□ -0.4
SHOX-202ENST00000381575 PPP3CBP16298 524 aa12.58□□□□□ -0.4
SHOX-202ENST00000381575 PSMB1P20618 241 aaKnown RBP12.58□□□□□ -0.4
SHOX-202ENST00000381575 ABCE1P61221 599 aaKnown RBP12.58□□□□□ -0.4
SHOX-202ENST00000381575 PHC1P78364 1004 aa12.58□□□□□ -0.4
SHOX-202ENST00000381575 SELENBP1Q13228 472 aa12.58□□□□□ -0.4
SHOX-202ENST00000381575 SKP2Q13309 424 aa12.58□□□□□ -0.4
SHOX-202ENST00000381575 MAPK14Q16539 360 aa12.58□□□□□ -0.4
SHOX-202ENST00000381575 TIGD2Q4W5G0 525 aa12.58□□□□□ -0.4
SHOX-202ENST00000381575 EMBQ6PCB8 327 aa12.58□□□□□ -0.4
SHOX-202ENST00000381575 C16orf62Q7Z3J2 963 aa12.58□□□□□ -0.4
SHOX-202ENST00000381575 GABRG1Q8N1C3 465 aa12.58□□□□□ -0.4
SHOX-202ENST00000381575 OR5W2Q8NH69 310 aa12.58□□□□□ -0.4
SHOX-202ENST00000381575 NEUROG1Q92886 237 aa12.58□□□□□ -0.4
SHOX-202ENST00000381575 MRGPRX4Q96LA9 322 aa12.58□□□□□ -0.4
SHOX-202ENST00000381575 OR5B2Q96R09 309 aa12.58□□□□□ -0.4
SHOX-202ENST00000381575 TIGARQ9NQ88 270 aa12.58□□□□□ -0.4
SHOX-202ENST00000381575 GPR52Q9Y2T5 361 aa12.58□□□□□ -0.4
SHOX-202ENST00000381575 ACTL7BQ9Y614 415 aa12.58□□□□□ -0.4
SHOX-202ENST00000381575 CR1P17927 2039 aa12.58□□□□□ -0.4
SHOX-202ENST00000381575 ANK3Q12955 4377 aaKnown RBP12.57□□□□□ -0.4
SHOX-202ENST00000381575 HS3ST1O14792 307 aa12.57□□□□□ -0.4
SHOX-202ENST00000381575 RGS16O15492 202 aaPredicted RBP12.57□□□□□ -0.4
SHOX-202ENST00000381575 CLOCKO15516 846 aa12.57□□□□□ -0.4
SHOX-202ENST00000381575 ADAP00813 363 aa12.57□□□□□ -0.4
SHOX-202ENST00000381575 HEXAP06865 529 aa12.57□□□□□ -0.4
SHOX-202ENST00000381575 PABPC4LP0CB38 370 aaKnown RBP12.57□□□□□ -0.4
SHOX-202ENST00000381575 OR12D1P0DN82 309 aa12.57□□□□□ -0.4
SHOX-202ENST00000381575 BGNP21810 368 aa12.57□□□□□ -0.4
SHOX-202ENST00000381575 IL32P24001 234 aa12.57□□□□□ -0.4
SHOX-202ENST00000381575 ADH6P28332 368 aa12.57□□□□□ -0.4
SHOX-202ENST00000381575 NR1H2P55055 460 aa12.57□□□□□ -0.4
SHOX-202ENST00000381575 NME5P56597 212 aa12.57□□□□□ -0.4
SHOX-202ENST00000381575 C21orf58P58505 322 aa12.57□□□□□ -0.4
SHOX-202ENST00000381575 MAD2L1Q13257 205 aaPredicted RBP12.57□□□□□ -0.4
SHOX-202ENST00000381575 CBFBQ13951 182 aa12.57□□□□□ -0.4
SHOX-202ENST00000381575 CAPRIN1Q14444 709 aaKnown RBP12.57□□□□□ -0.4
SHOX-202ENST00000381575 RNPS1Q15287 305 aaKnown RBP12.57□□□□□ -0.4
SHOX-202ENST00000381575 GTF2IRD2BQ6EKJ0 949 aa12.57□□□□□ -0.4
SHOX-202ENST00000381575 GTF2IRD2Q86UP8 949 aa12.57□□□□□ -0.4
SHOX-202ENST00000381575 NATD1Q8N6N6 113 aa12.57□□□□□ -0.4
SHOX-202ENST00000381575 TOR1AIP2Q8NFQ8 470 aa12.57□□□□□ -0.4
SHOX-202ENST00000381575 IGFBPL1Q8WX77 278 aa12.57□□□□□ -0.4
SHOX-202ENST00000381575 AKAP1Q92667 903 aaKnown RBP eCLIP12.57□□□□□ -0.4
SHOX-202ENST00000381575 ZNF300Q96RE9 604 aaPredicted RBP12.57□□□□□ -0.4
SHOX-202ENST00000381575 SORT1Q99523 831 aa12.57□□□□□ -0.4
SHOX-202ENST00000381575 DPY30Q9C005 99 aa12.57□□□□□ -0.4
SHOX-202ENST00000381575 NMUR2Q9GZQ4 415 aa12.57□□□□□ -0.4
SHOX-202ENST00000381575 CENPHQ9H3R5 247 aa12.57□□□□□ -0.4
SHOX-202ENST00000381575 ASIC5Q9NY37 505 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms