RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 RFLNBQ8N5W9 214 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 CYB561A3Q8NBI2 242 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 OR8H1Q8NGG4 311 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 ADAMTS15Q8TE58 950 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 RBCK1Q9BYM8 510 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 ADAP2Q9NPF8 381 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 ZNF222Q9UK12 451 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 LOC105369274A0A096LPK9 316 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 TRIM3O75382 744 aaPredicted RBP15.08■□□□□ 0
NKX3-1-201ENST00000380871 MPIP34949 423 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 ANXA11P50995 505 aaKnown RBP15.08■□□□□ 0
NKX3-1-201ENST00000380871 ACSM1Q08AH1 577 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 HBMQ6B0K9 141 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 TMEM92Q6UXU6 159 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 OR4N4Q8N0Y3 316 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 OR11H4Q8NGC9 324 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 KISS1RQ969F8 398 aaPredicted RBP15.08■□□□□ 0
NKX3-1-201ENST00000380871 MRGPRX1Q96LB2 322 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 COQ7Q99807 217 aa15.08■□□□□ 0
NKX3-1-201ENST00000380871 LDB3O75112 727 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 IL9P15248 144 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 SRSF5Q13243 272 aaKnown RBP15.07■□□□□ 0
NKX3-1-201ENST00000380871 MAPK14Q16539 360 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 SMUG1Q53HV7 270 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 SFXN4Q6P4A7 337 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 PRSS41Q7RTY9 318 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 FAM109AQ8N4B1 249 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 BEST4Q8NFU0 473 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 OR5W2Q8NH69 310 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 FANK1Q8TC84 345 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 BMFQ96LC9 184 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 CCDC86Q9H6F5 360 aaKnown RBP15.07■□□□□ 0
NKX3-1-201ENST00000380871 FBXO34Q9NWN3 711 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 KLHL28Q9NXS3 571 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 MAT2BQ9NZL9 334 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 CLEC1BQ9P126 229 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 ZMIZ1Q9ULJ6 1067 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 MRPS7Q9Y2R9 242 aaKnown RBP15.07■□□□□ 0
NKX3-1-201ENST00000380871 DAPL1A0PJW8 107 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 LRRC72A6NJI9 287 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 SLC9B1P1A6NJY1 282 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 HTR2AP28223 471 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 ATP12AP54707 1039 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 DEFB110Q30KQ9 67 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 OR4D9Q8NGE8 314 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 CDCP1Q9H5V8 836 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 BEX1Q9HBH7 125 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 ADAM30Q9UKF2 790 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 TCRBV21S2A2A0A5A6 115 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 ZSCAN5BA6NJL1 495 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 MTNR1BP49286 362 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 ZNF136P52737 540 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 HCCSP53701 268 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 NTRK2Q16620 822 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 TMEM35AQ53FP2 167 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 CREB3L2Q70SY1 520 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 VN1R4Q7Z5H5 301 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 CEACAM19Q7Z692 300 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 LRRC28Q86X40 367 aaPredicted RBP15.07■□□□□ 0
NKX3-1-201ENST00000380871 ZNF614Q8N883 585 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 TTLQ8NG68 377 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 TRMT10AQ8TBZ6 339 aaKnown RBP15.07■□□□□ 0
NKX3-1-201ENST00000380871 MRPL38Q96DV4 380 aaKnown RBP15.07■□□□□ 0
NKX3-1-201ENST00000380871 PRSS27Q9BQR3 290 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 ACTRT3Q9BYD9 372 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 SLCO1C1Q9NYB5 712 aa15.07■□□□□ 0
NKX3-1-201ENST00000380871 MRPS2Q9Y399 296 aaKnown RBP15.07■□□□□ 0
NKX3-1-201ENST00000380871 TDRD6O60522 2096 aaKnown RBP15.07■□□□□ 0
NKX3-1-201ENST00000380871 P2RX6O15547 441 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 CTSVO60911 334 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 CELA2BP08218 269 aaPredicted RBP15.06■□□□□ 0
NKX3-1-201ENST00000380871 TEAD1P28347 426 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 PRKAR1BP31321 381 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 TALDO1P37837 337 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 PITPNBP48739 271 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 CCR6P51684 374 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 C19orf57Q0VDD7 668 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 DUSP5Q16690 384 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 ZC3H14Q6PJT7 736 aaKnown RBP15.06■□□□□ 0
NKX3-1-201ENST00000380871 OR5T3Q8NGG3 340 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 OR13C2Q8NGS9 318 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 PTP4A1Q93096 173 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 WDR92Q96MX6 357 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 RAB11FIP5Q9BXF6 653 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 TEX12Q9BXU0 123 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 MED28Q9H204 178 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 MGAT4AQ9UM21 535 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 WDR45Q9Y484 360 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 SPTBN5Q9NRC6 3674 aaKnown RBP15.06■□□□□ 0
NKX3-1-201ENST00000380871 A0A0G2JK05 382 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 J3QLW9 94 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 ZNF19P17023 458 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 IFNA8P32881 189 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 OR12D2P58182 307 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 PPP1CAP62136 330 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 LYPD4Q6UWN0 246 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 SSX6Q7RTT6 188 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 OAFQ86UD1 273 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 OR6C4Q8NGE1 309 aa15.06■□□□□ 0
NKX3-1-201ENST00000380871 C4orf36Q96KX1 117 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms