RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 LINGO3P0C6S8 592 aa17.05■□□□□ 0.32
SMN2-202ENST00000380742 PGCP20142 388 aa17.05■□□□□ 0.32
SMN2-202ENST00000380742 MST1P26927 711 aa17.05■□□□□ 0.32
SMN2-202ENST00000380742 OR1E2P47887 323 aa17.05■□□□□ 0.32
SMN2-202ENST00000380742 SLC6A8P48029 635 aa17.05■□□□□ 0.32
SMN2-202ENST00000380742 RGS8P57771 180 aaPredicted RBP17.05■□□□□ 0.32
SMN2-202ENST00000380742 FOXK1P85037 733 aa17.05■□□□□ 0.32
SMN2-202ENST00000380742 GANABQ14697 944 aaKnown RBP17.05■□□□□ 0.32
SMN2-202ENST00000380742 QPRTQ15274 297 aa17.05■□□□□ 0.32
SMN2-202ENST00000380742 NPTX1Q15818 432 aa17.05■□□□□ 0.32
SMN2-202ENST00000380742 PLPPR5Q32ZL2 321 aa17.05■□□□□ 0.32
SMN2-202ENST00000380742 CMPK2Q5EBM0 449 aa17.05■□□□□ 0.32
SMN2-202ENST00000380742 ZNF324BQ6AW86 544 aaPredicted RBP17.05■□□□□ 0.32
SMN2-202ENST00000380742 YRDCQ86U90 279 aaKnown RBP17.05■□□□□ 0.32
SMN2-202ENST00000380742 CARM1Q86X55 608 aa17.05■□□□□ 0.32
SMN2-202ENST00000380742 OR6T1Q8NGN1 323 aa17.05■□□□□ 0.32
SMN2-202ENST00000380742 OR2B2Q9GZK3 357 aa17.05■□□□□ 0.32
SMN2-202ENST00000380742 DEFB127Q9H1M4 99 aa17.05■□□□□ 0.32
SMN2-202ENST00000380742 MED17Q9NVC6 651 aa17.05■□□□□ 0.32
SMN2-202ENST00000380742 QPCTLQ9NXS2 382 aa17.05■□□□□ 0.32
SMN2-202ENST00000380742 ANAPC2Q9UJX6 822 aa17.05■□□□□ 0.32
SMN2-202ENST00000380742 DKKL1Q9UK85 242 aa17.05■□□□□ 0.32
SMN2-202ENST00000380742 MRPS18CQ9Y3D5 142 aaKnown RBP17.05■□□□□ 0.32
SMN2-202ENST00000380742 V9GYQ6 96 aa17.05■□□□□ 0.32
SMN2-202ENST00000380742 ZNF407Q9C0G0 2248 aa17.05■□□□□ 0.32
SMN2-202ENST00000380742 HK1P19367 917 aa17.04■□□□□ 0.32
SMN2-202ENST00000380742 TCEA1P23193 301 aaKnown RBP17.04■□□□□ 0.32
SMN2-202ENST00000380742 FLOT2Q14254 428 aa17.04■□□□□ 0.32
SMN2-202ENST00000380742 SLC10A1Q14973 349 aa17.04■□□□□ 0.32
SMN2-202ENST00000380742 MTX3Q5HYI7 312 aa17.04■□□□□ 0.32
SMN2-202ENST00000380742 WIPI1Q5MNZ9 446 aaPredicted RBP17.04■□□□□ 0.32
SMN2-202ENST00000380742 PYURFQ96I23 114 aa17.04■□□□□ 0.32
SMN2-202ENST00000380742 LRGUKQ96M69 825 aa17.04■□□□□ 0.32
SMN2-202ENST00000380742 EVA1AQ9H8M9 152 aa17.04■□□□□ 0.32
SMN2-202ENST00000380742 TAS2R10Q9NYW0 307 aa17.04■□□□□ 0.32
SMN2-202ENST00000380742 SLC9A8Q9Y2E8 581 aa17.04■□□□□ 0.32
SMN2-202ENST00000380742 LIPGQ9Y5X9 500 aa17.04■□□□□ 0.32
SMN2-202ENST00000380742 MED12Q93074 2177 aa17.04■□□□□ 0.32
SMN2-202ENST00000380742 DNAJC13O75165 2243 aa17.04■□□□□ 0.32
SMN2-202ENST00000380742 A0A087WZY1 265 aa17.03■□□□□ 0.32
SMN2-202ENST00000380742 TTLL8A6PVC2 850 aa17.03■□□□□ 0.32
SMN2-202ENST00000380742 SHISA8B8ZZ34 492 aa17.03■□□□□ 0.32
SMN2-202ENST00000380742 NPIPA5E9PKD4 350 aa17.03■□□□□ 0.32
SMN2-202ENST00000380742 FAAHO00519 579 aa17.03■□□□□ 0.32
SMN2-202ENST00000380742 STAMBPO95630 424 aa17.03■□□□□ 0.32
SMN2-202ENST00000380742 HTR2AP28223 471 aa17.03■□□□□ 0.32
SMN2-202ENST00000380742 IDH2P48735 452 aaKnown RBP17.03■□□□□ 0.32
SMN2-202ENST00000380742 ZNF41P51814 821 aaPredicted RBP17.03■□□□□ 0.32
SMN2-202ENST00000380742 IFI44LQ53G44 452 aa17.03■□□□□ 0.32
SMN2-202ENST00000380742 FKBP9P1Q75LS8 142 aa17.03■□□□□ 0.32
SMN2-202ENST00000380742 OR5M1Q8NGP8 315 aa17.03■□□□□ 0.32
SMN2-202ENST00000380742 OR14L1PQ8NHC6 308 aa17.03■□□□□ 0.32
SMN2-202ENST00000380742 ZNF563Q8TA94 476 aa17.03■□□□□ 0.32
SMN2-202ENST00000380742 POC1BQ8TC44 478 aa17.03■□□□□ 0.32
SMN2-202ENST00000380742 FAR1Q8WVX9 515 aa17.03■□□□□ 0.32
SMN2-202ENST00000380742 BARD1Q99728 777 aaKnown RBP17.03■□□□□ 0.32
SMN2-202ENST00000380742 SLC6A15Q9H2J7 730 aa17.03■□□□□ 0.32
SMN2-202ENST00000380742 ACKR4Q9NPB9 350 aa17.03■□□□□ 0.32
SMN2-202ENST00000380742 ASF1BQ9NVP2 202 aa17.03■□□□□ 0.32
SMN2-202ENST00000380742 NPIPA1Q9UND3 350 aa17.03■□□□□ 0.32
SMN2-202ENST00000380742 RPH3AQ9Y2J0 694 aaPredicted RBP17.03■□□□□ 0.32
SMN2-202ENST00000380742 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.02■□□□□ 0.32
SMN2-202ENST00000380742 AQP12BA6NM10 295 aa17.02■□□□□ 0.32
SMN2-202ENST00000380742 SEMA7AO75326 666 aa17.02■□□□□ 0.32
SMN2-202ENST00000380742 SEMG1P04279 462 aa17.02■□□□□ 0.32
SMN2-202ENST00000380742 NQO1P15559 274 aaKnown RBP17.02■□□□□ 0.32
SMN2-202ENST00000380742 PRKCAP17252 672 aa17.02■□□□□ 0.32
SMN2-202ENST00000380742 ERFP50548 548 aa17.02■□□□□ 0.32
SMN2-202ENST00000380742 MLLT10P55197 1068 aa17.02■□□□□ 0.32
SMN2-202ENST00000380742 SESN3P58005 492 aa17.02■□□□□ 0.32
SMN2-202ENST00000380742 B3GALT5-AS1P59052 145 aa17.02■□□□□ 0.32
SMN2-202ENST00000380742 TMEM44Q2T9K0 475 aa17.02■□□□□ 0.32
SMN2-202ENST00000380742 TSPYL5Q86VY4 417 aaPredicted RBP17.02■□□□□ 0.32
SMN2-202ENST00000380742 LSRQ86X29 649 aaPredicted RBP17.02■□□□□ 0.32
SMN2-202ENST00000380742 AQP12AQ8IXF9 295 aa17.02■□□□□ 0.32
SMN2-202ENST00000380742 GEMIN6Q8WXD5 167 aaKnown RBP17.02■□□□□ 0.32
SMN2-202ENST00000380742 NR4A3Q92570 626 aa17.02■□□□□ 0.32
SMN2-202ENST00000380742 ZBTB8AQ96BR9 441 aa17.02■□□□□ 0.32
SMN2-202ENST00000380742 MCHR1Q99705 422 aa17.02■□□□□ 0.32
SMN2-202ENST00000380742 TRIM15Q9C019 465 aa17.02■□□□□ 0.32
SMN2-202ENST00000380742 AMBRA1Q9C0C7 1298 aa17.02■□□□□ 0.32
SMN2-202ENST00000380742 TESQ9UGI8 421 aaKnown RBP17.02■□□□□ 0.32
SMN2-202ENST00000380742 SHANK1Q9Y566 2161 aa17.02■□□□□ 0.32
SMN2-202ENST00000380742 FAM47E-STBD1D6RA91 191 aa17.02■□□□□ 0.31
SMN2-202ENST00000380742 ANKRD65E5RJM6 399 aa17.02■□□□□ 0.31
SMN2-202ENST00000380742 ETV2O00321 342 aaPredicted RBP17.02■□□□□ 0.31
SMN2-202ENST00000380742 CIB2O75838 187 aa17.02■□□□□ 0.31
SMN2-202ENST00000380742 NTN1O95631 604 aa17.02■□□□□ 0.31
SMN2-202ENST00000380742 IGHG3P01860 377 aa17.02■□□□□ 0.31
SMN2-202ENST00000380742 UQCRBP14927 111 aa17.02■□□□□ 0.31
SMN2-202ENST00000380742 PSMA4P25789 261 aaKnown RBP17.02■□□□□ 0.31
SMN2-202ENST00000380742 DLX5P56178 289 aa17.02■□□□□ 0.31
SMN2-202ENST00000380742 FOXF1Q12946 379 aa17.02■□□□□ 0.31
SMN2-202ENST00000380742 GLYR1Q49A26 553 aaPredicted RBP17.02■□□□□ 0.31
SMN2-202ENST00000380742 SLC25A53Q5H9E4 307 aa17.02■□□□□ 0.31
SMN2-202ENST00000380742 C1orf146Q5VVC0 180 aa17.02■□□□□ 0.31
SMN2-202ENST00000380742 TSEN54Q7Z6J9 526 aaKnown RBP17.02■□□□□ 0.31
SMN2-202ENST00000380742 RANBP3LQ86VV4 465 aaPredicted RBP17.02■□□□□ 0.31
SMN2-202ENST00000380742 CADM2Q8N3J6 435 aa17.02■□□□□ 0.31
SMN2-202ENST00000380742 PHF10Q8WUB8 498 aaKnown RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms