RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 ICAM5Q9UMF0 924 aa20.49■□□□□ 0.87
U2AF1-202ENST00000380276 TMEM114B3SHH9 223 aa20.48■□□□□ 0.87
U2AF1-202ENST00000380276 ZNF814B7Z6K7 855 aa20.48■□□□□ 0.87
U2AF1-202ENST00000380276 SCAMP2O15127 329 aaKnown RBP20.48■□□□□ 0.87
U2AF1-202ENST00000380276 CYP7B1O75881 506 aa20.48■□□□□ 0.87
U2AF1-202ENST00000380276 CRHR1P34998 444 aa20.48■□□□□ 0.87
U2AF1-202ENST00000380276 CCT3P49368 545 aaKnown RBP20.48■□□□□ 0.87
U2AF1-202ENST00000380276 CDH11P55287 796 aa20.48■□□□□ 0.87
U2AF1-202ENST00000380276 C21orf58P58505 322 aa20.48■□□□□ 0.87
U2AF1-202ENST00000380276 RASGEF1BQ0VAM2 473 aa20.48■□□□□ 0.87
U2AF1-202ENST00000380276 PGGHGQ32M88 737 aa20.48■□□□□ 0.87
U2AF1-202ENST00000380276 KLHL26Q53HC5 615 aa20.48■□□□□ 0.87
U2AF1-202ENST00000380276 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.48■□□□□ 0.87
U2AF1-202ENST00000380276 KANK2Q63ZY3 851 aa20.48■□□□□ 0.87
U2AF1-202ENST00000380276 PODNL1Q6PEZ8 512 aa20.48■□□□□ 0.87
U2AF1-202ENST00000380276 C4orf33Q8N1A6 199 aa20.48■□□□□ 0.87
U2AF1-202ENST00000380276 TOR1AIP2Q8NFQ8 470 aa20.48■□□□□ 0.87
U2AF1-202ENST00000380276 GPR119Q8TDV5 335 aa20.48■□□□□ 0.87
U2AF1-202ENST00000380276 TWIST2Q8WVJ9 160 aa20.48■□□□□ 0.87
U2AF1-202ENST00000380276 MUCL1Q96DR8 90 aa20.48■□□□□ 0.87
U2AF1-202ENST00000380276 OR5B2Q96R09 309 aa20.48■□□□□ 0.87
U2AF1-202ENST00000380276 BARX1Q9HBU1 254 aaPredicted RBP20.48■□□□□ 0.87
U2AF1-202ENST00000380276 FAIMQ9NVQ4 179 aa20.48■□□□□ 0.87
U2AF1-202ENST00000380276 GIMAP2Q9UG22 337 aa20.48■□□□□ 0.87
U2AF1-202ENST00000380276 DNAJC15Q9Y5T4 150 aa20.48■□□□□ 0.87
U2AF1-202ENST00000380276 CR1P17927 2039 aa20.48■□□□□ 0.87
U2AF1-202ENST00000380276 TLX2O43763 284 aaPredicted RBP20.47■□□□□ 0.87
U2AF1-202ENST00000380276 CD5LO43866 347 aa20.47■□□□□ 0.87
U2AF1-202ENST00000380276 SSX4O60224 188 aa20.47■□□□□ 0.87
U2AF1-202ENST00000380276 RAMP1O60894 148 aa20.47■□□□□ 0.87
U2AF1-202ENST00000380276 SHBGP04278 402 aa20.47■□□□□ 0.87
U2AF1-202ENST00000380276 KRT16P08779 473 aa20.47■□□□□ 0.87
U2AF1-202ENST00000380276 MAPK1P28482 360 aa20.47■□□□□ 0.87
U2AF1-202ENST00000380276 SOAT1P35610 550 aa20.47■□□□□ 0.87
U2AF1-202ENST00000380276 RPL3P39023 403 aaKnown RBP20.47■□□□□ 0.87
U2AF1-202ENST00000380276 ATP12AP54707 1039 aa20.47■□□□□ 0.87
U2AF1-202ENST00000380276 MLC1Q15049 377 aa20.47■□□□□ 0.87
U2AF1-202ENST00000380276 EXOSC6Q5RKV6 272 aaKnown RBP20.47■□□□□ 0.87
U2AF1-202ENST00000380276 Q6ZT83 130 aa20.47■□□□□ 0.87
U2AF1-202ENST00000380276 ZNF100Q8IYN0 542 aa20.47■□□□□ 0.87
U2AF1-202ENST00000380276 OR56A1Q8NGH5 318 aa20.47■□□□□ 0.87
U2AF1-202ENST00000380276 AGR3Q8TD06 166 aa20.47■□□□□ 0.87
U2AF1-202ENST00000380276 UBLCP1Q8WVY7 318 aaPredicted RBP20.47■□□□□ 0.87
U2AF1-202ENST00000380276 ARL8AQ96BM9 186 aa20.47■□□□□ 0.87
U2AF1-202ENST00000380276 MRGPRX4Q96LA9 322 aa20.47■□□□□ 0.87
U2AF1-202ENST00000380276 ZNF300Q96RE9 604 aaPredicted RBP20.47■□□□□ 0.87
U2AF1-202ENST00000380276 PSD2Q9BQI7 771 aa20.47■□□□□ 0.87
U2AF1-202ENST00000380276 RHNO1Q9BSD3 238 aa20.47■□□□□ 0.87
U2AF1-202ENST00000380276 TRAF4Q9BUZ4 470 aaPredicted RBP20.47■□□□□ 0.87
U2AF1-202ENST00000380276 GATA5Q9BWX5 397 aaPredicted RBP20.47■□□□□ 0.87
U2AF1-202ENST00000380276 TRIM2Q9C040 744 aa20.47■□□□□ 0.87
U2AF1-202ENST00000380276 ATP6V1HQ9UI12 483 aa20.47■□□□□ 0.87
U2AF1-202ENST00000380276 DTNAQ9Y4J8 743 aa20.47■□□□□ 0.87
U2AF1-202ENST00000380276 ACTL7BQ9Y614 415 aa20.47■□□□□ 0.87
U2AF1-202ENST00000380276 KCNE3Q9Y6H6 103 aa20.47■□□□□ 0.87
U2AF1-202ENST00000380276 TMEM233B4DJY2 109 aa20.46■□□□□ 0.87
U2AF1-202ENST00000380276 PIP5K1BO14986 540 aa20.46■□□□□ 0.87
U2AF1-202ENST00000380276 CFLARO15519 480 aa20.46■□□□□ 0.87
U2AF1-202ENST00000380276 C6orf47O95873 294 aa20.46■□□□□ 0.87
U2AF1-202ENST00000380276 LAMP1P11279 417 aa20.46■□□□□ 0.87
U2AF1-202ENST00000380276 UBL4AP11441 157 aa20.46■□□□□ 0.87
U2AF1-202ENST00000380276 KRT4P19013 534 aa20.46■□□□□ 0.87
U2AF1-202ENST00000380276 OR3A2P47893 321 aa20.46■□□□□ 0.87
U2AF1-202ENST00000380276 RAC3P60763 192 aa20.46■□□□□ 0.87
U2AF1-202ENST00000380276 QPRTQ15274 297 aa20.46■□□□□ 0.87
U2AF1-202ENST00000380276 OR5AK3PQ8NH89 298 aa20.46■□□□□ 0.87
U2AF1-202ENST00000380276 OR5P2Q8WZ92 322 aa20.46■□□□□ 0.87
U2AF1-202ENST00000380276 TRMOQ9BU70 441 aa20.46■□□□□ 0.87
U2AF1-202ENST00000380276 TXLNGYQ9BZA5 131 aa20.46■□□□□ 0.87
U2AF1-202ENST00000380276 ABCD4O14678 606 aa20.45■□□□□ 0.86
U2AF1-202ENST00000380276 ZNF264O43296 627 aa20.45■□□□□ 0.86
U2AF1-202ENST00000380276 PEX11AO75192 247 aa20.45■□□□□ 0.86
U2AF1-202ENST00000380276 NUDT6P53370 316 aa20.45■□□□□ 0.86
U2AF1-202ENST00000380276 CBFBQ13951 182 aa20.45■□□□□ 0.86
U2AF1-202ENST00000380276 PCLAFQ15004 111 aa20.45■□□□□ 0.86
U2AF1-202ENST00000380276 C3orf33Q6P1S2 294 aa20.45■□□□□ 0.86
U2AF1-202ENST00000380276 OR5W2Q8NH69 310 aa20.45■□□□□ 0.86
U2AF1-202ENST00000380276 C1orf50Q9BV19 199 aa20.45■□□□□ 0.86
U2AF1-202ENST00000380276 QRSL1Q9H0R6 528 aaKnown RBP20.45■□□□□ 0.86
U2AF1-202ENST00000380276 BCO1Q9HAY6 547 aa20.45■□□□□ 0.86
U2AF1-202ENST00000380276 ATAD3AQ9NVI7 634 aa20.45■□□□□ 0.86
U2AF1-202ENST00000380276 POU2F3Q9UKI9 436 aa20.45■□□□□ 0.86
U2AF1-202ENST00000380276 SMAD9O15198 467 aaKnown RBP20.44■□□□□ 0.86
U2AF1-202ENST00000380276 TRIM13O60858 407 aa20.44■□□□□ 0.86
U2AF1-202ENST00000380276 CHRNGP07510 517 aa20.44■□□□□ 0.86
U2AF1-202ENST00000380276 GGT1P19440 569 aa20.44■□□□□ 0.86
U2AF1-202ENST00000380276 LSM12Q3MHD2 195 aaKnown RBP20.44■□□□□ 0.86
U2AF1-202ENST00000380276 PDZK1Q5T2W1 519 aa20.44■□□□□ 0.86
U2AF1-202ENST00000380276 SEZ6L2Q6UXD5 910 aa20.44■□□□□ 0.86
U2AF1-202ENST00000380276 RNF165Q6ZSG1 346 aa20.44■□□□□ 0.86
U2AF1-202ENST00000380276 HIPK1Q86Z02 1210 aa20.44■□□□□ 0.86
U2AF1-202ENST00000380276 UBE2J2Q8N2K1 259 aa20.44■□□□□ 0.86
U2AF1-202ENST00000380276 OR5D16Q8NGK9 328 aa20.44■□□□□ 0.86
U2AF1-202ENST00000380276 EPS8L3Q8TE67 593 aaKnown RBP20.44■□□□□ 0.86
U2AF1-202ENST00000380276 PPP3R2Q96LZ3 170 aa20.44■□□□□ 0.86
U2AF1-202ENST00000380276 OR7D2Q96RA2 312 aa20.44■□□□□ 0.86
U2AF1-202ENST00000380276 TRAF6Q9Y4K3 522 aa20.44■□□□□ 0.86
U2AF1-202ENST00000380276 FBN1P35555 2871 aaKnown RBP20.43■□□□□ 0.86
U2AF1-202ENST00000380276 A8MV72 311 aaPredicted RBP20.43■□□□□ 0.86
U2AF1-202ENST00000380276 SHISA9B4DS77 424 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms