RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 TIGD4Q8IY51 512 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 NATD1Q8N6N6 113 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 CELF2-AS1Q8N7Q2 184 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 ZNF454Q8N9F8 522 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 OR52N5Q8NH56 324 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 BBS10Q8TAM1 723 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 ZNF480Q8WV37 535 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 SENP5Q96HI0 755 aaPredicted RBP6.08□□□□□ -1.44
NEDD9-202ENST00000379446 SDR39U1Q9NRG7 319 aaPredicted RBP6.08□□□□□ -1.44
NEDD9-202ENST00000379446 PLSCR3Q9NRY6 295 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 ERVK13-1Q9NX77 482 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 CNOT11Q9UKZ1 510 aaKnown RBP6.08□□□□□ -1.44
NEDD9-202ENST00000379446 A0A1W2PQ09 198 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 ELOVL7A1L3X0 281 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 LGALS8O00214 317 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 EMC8O43402 210 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 NOS1APO75052 506 aaPredicted RBP6.08□□□□□ -1.44
NEDD9-202ENST00000379446 MOSPD3O75425 235 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 ZNF821O75541 412 aaPredicted RBP6.08□□□□□ -1.44
NEDD9-202ENST00000379446 GPR75O95800 540 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 TMIGD3P0DMS9 266 aaPredicted RBP6.08□□□□□ -1.44
NEDD9-202ENST00000379446 CD36P16671 472 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 GNLYP22749 145 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 GABRA2P47869 451 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 FASLGP48023 281 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 IDH3GP51553 393 aaPredicted RBP6.08□□□□□ -1.44
NEDD9-202ENST00000379446 YBX1P67809 324 aaKnown RBP6.08□□□□□ -1.44
NEDD9-202ENST00000379446 RUNX1T1Q06455 604 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 FAM209AQ5JX71 171 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 OR2A2Q6IF42 318 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 LCN8Q6JVE9 175 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 ZNF773Q6PK81 442 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 FRRS1Q6ZNA5 592 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 MRPL21Q7Z2W9 205 aaKnown RBP6.08□□□□□ -1.44
NEDD9-202ENST00000379446 GOLGA7Q7Z5G4 137 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 CCDC28AQ8IWP9 274 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 KRTCAP2Q8N6L1 136 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 PACRGLQ8N7B6 248 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 OR4C15Q8NGM1 316 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 OR52J3Q8NH60 311 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 CLCC1Q96S66 551 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 ATOH8Q96SQ7 321 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 PITX2Q99697 317 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 DERL2Q9GZP9 239 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 PARD6AQ9NPB6 346 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 ARMC1Q9NVT9 282 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 GRHPRQ9UBQ7 328 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 MMACHCQ9Y4U1 282 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 TRBC2A0A5B9 178 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 ZNF99A8MXY4 864 aaPredicted RBP6.08□□□□□ -1.44
NEDD9-202ENST00000379446 CXCR6O00574 342 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 LCATP04180 440 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 RAP2AP10114 183 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 HSD17B1P14061 328 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 ZNF20P17024 532 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 PRPS1L1P21108 318 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 ENPP1P22413 925 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 MYF6P23409 242 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 FABP6P51161 128 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 TUBA1BP68363 451 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 CAMK2DQ13557 499 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 ATP6AP1Q15904 470 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 SPINK14Q6IE38 97 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 LETMD1Q6P1Q0 360 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 THSD4Q6ZMP0 1018 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 TUBA1AQ71U36 451 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 KANSL1Q7Z3B3 1105 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 MRGPREQ86SM8 312 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 BEST3Q8N1M1 668 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 DTWD1Q8N5C7 304 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 OR5M1Q8NGP8 315 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 OR56A3Q8NH54 315 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 ZNF420Q8TAQ5 688 aaPredicted RBP6.08□□□□□ -1.44
NEDD9-202ENST00000379446 RASSF5Q8WWW0 418 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 DNASE2BQ8WZ79 361 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 ULBP2Q9BZM5 246 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 HOXD1Q9GZZ0 328 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 DCSTAMPQ9H295 470 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 ESRP2Q9H6T0 727 aaKnown RBP6.08□□□□□ -1.44
NEDD9-202ENST00000379446 BARX1Q9HBU1 254 aaPredicted RBP6.08□□□□□ -1.44
NEDD9-202ENST00000379446 MOV10Q9HCE1 1003 aaKnown RBP6.08□□□□□ -1.44
NEDD9-202ENST00000379446 FARSBQ9NSD9 589 aaKnown RBP6.08□□□□□ -1.44
NEDD9-202ENST00000379446 ZNF355PQ9NSJ1 428 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 SPATA2Q9UM82 520 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 PCDHGB2Q9Y5G2 931 aa6.08□□□□□ -1.44
NEDD9-202ENST00000379446 WASH4PA8MWX3 477 aa6.07□□□□□ -1.44
NEDD9-202ENST00000379446 EFCAB9A8MZ26 197 aa6.07□□□□□ -1.44
NEDD9-202ENST00000379446 FAM25AB3EWG3 89 aa6.07□□□□□ -1.44
NEDD9-202ENST00000379446 FAM25CB3EWG5 89 aa6.07□□□□□ -1.44
NEDD9-202ENST00000379446 FAM25GB3EWG6 89 aa6.07□□□□□ -1.44
NEDD9-202ENST00000379446 C6orf47O95873 294 aa6.07□□□□□ -1.44
NEDD9-202ENST00000379446 HOXC8P31273 242 aa6.07□□□□□ -1.44
NEDD9-202ENST00000379446 CCR7P32248 378 aa6.07□□□□□ -1.44
NEDD9-202ENST00000379446 DRD3P35462 400 aa6.07□□□□□ -1.44
NEDD9-202ENST00000379446 POLR2IP36954 125 aaKnown RBP6.07□□□□□ -1.44
NEDD9-202ENST00000379446 DSTNP60981 165 aa6.07□□□□□ -1.44
NEDD9-202ENST00000379446 IL18R1Q13478 541 aa6.07□□□□□ -1.44
NEDD9-202ENST00000379446 HES1Q14469 280 aa6.07□□□□□ -1.44
NEDD9-202ENST00000379446 ZMYND11Q15326 602 aa6.07□□□□□ -1.44
NEDD9-202ENST00000379446 CEBPEQ15744 281 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms