RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 FAM53BQ14153 422 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 ZNHIT3Q15649 155 aaPredicted RBP13.72□□□□□ -0.21
PRNP-201ENST00000379440 TIMM50Q3ZCQ8 353 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 MINDY4Q4G0A6 757 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 PXDC1Q5TGL8 231 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 RCBTB1Q8NDN9 531 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 OR51Q1Q8NH59 317 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 C1orf216Q8TAB5 229 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 TXNDC15Q96J42 360 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 OR52D1Q9H346 318 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 UBQLN3Q9H347 655 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 PDE7BQ9NP56 450 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 SIDT1Q9NXL6 827 aaKnown RBP13.72□□□□□ -0.21
PRNP-201ENST00000379440 ERVK-19Q9WJR5 959 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 UNC119BA6NIH7 251 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 LMO7DNF2Z398 122 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 CLDN4O14493 209 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 RFPL3O75679 317 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 PAHP00439 452 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 CRYBB2P43320 205 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 SEPHS1P49903 392 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 HNRNPKP61978 463 aaKnown RBP eCLIP13.72□□□□□ -0.21
PRNP-201ENST00000379440 RAB40BQ12829 278 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 C1DQ13901 141 aaKnown RBP13.72□□□□□ -0.21
PRNP-201ENST00000379440 AADACL4Q5VUY2 407 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 KRT77Q7Z794 578 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 PHC2Q8IXK0 858 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 OR2T33Q8NG76 320 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 OR4F15Q8NGB8 312 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 GATAD2BQ8WXI9 593 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 TTC9Q92623 222 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 OTULINQ96BN8 352 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 ZNF285Q96NJ3 590 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 DACH2Q96NX9 599 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 MRPS18AQ9NVS2 196 aaKnown RBP13.72□□□□□ -0.21
PRNP-201ENST00000379440 FLRT3Q9NZU0 649 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 RNF215Q9Y6U7 377 aa13.72□□□□□ -0.21
PRNP-201ENST00000379440 STK25O00506 426 aa13.71□□□□□ -0.21
PRNP-201ENST00000379440 MYF5P13349 255 aa13.71□□□□□ -0.21
PRNP-201ENST00000379440 MYL12AP19105 171 aa13.71□□□□□ -0.21
PRNP-201ENST00000379440 BTF3P20290 206 aaKnown RBP13.71□□□□□ -0.21
PRNP-201ENST00000379440 STARD6P59095 220 aa13.71□□□□□ -0.21
PRNP-201ENST00000379440 COPZ1P61923 177 aa13.71□□□□□ -0.21
PRNP-201ENST00000379440 SKP1P63208 163 aa13.71□□□□□ -0.21
PRNP-201ENST00000379440 IGLV3-21P80748 117 aaPredicted RBP13.71□□□□□ -0.21
PRNP-201ENST00000379440 MLLT11Q13015 90 aaPredicted RBP13.71□□□□□ -0.21
PRNP-201ENST00000379440 C14orf28Q4W4Y0 310 aa13.71□□□□□ -0.21
PRNP-201ENST00000379440 C3orf38Q5JPI3 329 aa13.71□□□□□ -0.21
PRNP-201ENST00000379440 B3GLCTQ6Y288 498 aa13.71□□□□□ -0.21
PRNP-201ENST00000379440 LHFPL3Q86UP9 236 aa13.71□□□□□ -0.21
PRNP-201ENST00000379440 OR6C4Q8NGE1 309 aa13.71□□□□□ -0.21
PRNP-201ENST00000379440 HLA-CQ95604 372 aa13.71□□□□□ -0.21
PRNP-201ENST00000379440 TMEM203Q969S6 136 aa13.71□□□□□ -0.21
PRNP-201ENST00000379440 CEP19Q96LK0 163 aa13.71□□□□□ -0.21
PRNP-201ENST00000379440 PRRG3Q9BZD7 231 aa13.71□□□□□ -0.21
PRNP-201ENST00000379440 NXF2Q9GZY0 626 aaKnown RBP13.71□□□□□ -0.21
PRNP-201ENST00000379440 RERGLQ9H628 205 aa13.71□□□□□ -0.21
PRNP-201ENST00000379440 FGF20Q9NP95 211 aaPredicted RBP13.71□□□□□ -0.21
PRNP-201ENST00000379440 MEPEQ9NQ76 525 aaPredicted RBP13.71□□□□□ -0.21
PRNP-201ENST00000379440 LRIT1Q9P2V4 623 aa13.71□□□□□ -0.21
PRNP-201ENST00000379440 TLCD2A6NGC4 264 aa13.71□□□□□ -0.22
PRNP-201ENST00000379440 RHPN2P1A8MT19 583 aa13.71□□□□□ -0.22
PRNP-201ENST00000379440 TRIM77I1YAP6 450 aa13.71□□□□□ -0.22
PRNP-201ENST00000379440 HYAL3O43820 417 aaPredicted RBP13.71□□□□□ -0.22
PRNP-201ENST00000379440 IFNA16P05015 189 aa13.71□□□□□ -0.22
PRNP-201ENST00000379440 PSMA1P25786 263 aaKnown RBP13.71□□□□□ -0.22
PRNP-201ENST00000379440 GPR3P46089 330 aa13.71□□□□□ -0.22
PRNP-201ENST00000379440 OR1D5P58170 312 aa13.71□□□□□ -0.22
PRNP-201ENST00000379440 SLC35F1Q5T1Q4 408 aa13.71□□□□□ -0.22
PRNP-201ENST00000379440 OGFOD3Q6PK18 319 aa13.71□□□□□ -0.22
PRNP-201ENST00000379440 SMARCD3Q6STE5 483 aa13.71□□□□□ -0.22
PRNP-201ENST00000379440 C16orf52Q8NHV5 167 aa13.71□□□□□ -0.22
PRNP-201ENST00000379440 TM9SF4Q92544 642 aa13.71□□□□□ -0.22
PRNP-201ENST00000379440 CD180Q99467 661 aa13.71□□□□□ -0.22
PRNP-201ENST00000379440 TM9SF2Q99805 663 aa13.71□□□□□ -0.22
PRNP-201ENST00000379440 CHRDQ9H2X0 955 aa13.71□□□□□ -0.22
PRNP-201ENST00000379440 KRCC1Q9NPI7 259 aaPredicted RBP13.71□□□□□ -0.22
PRNP-201ENST00000379440 HINT3Q9NQE9 182 aaKnown RBP13.71□□□□□ -0.22
PRNP-201ENST00000379440 POLE3Q9NRF9 147 aa13.71□□□□□ -0.22
PRNP-201ENST00000379440 NDUFB11Q9NX14 153 aa13.71□□□□□ -0.22
PRNP-201ENST00000379440 CCDC59Q9P031 241 aaKnown RBP13.71□□□□□ -0.22
PRNP-201ENST00000379440 SPIN1Q9Y657 262 aaPredicted RBP13.71□□□□□ -0.22
PRNP-201ENST00000379440 SOCS6O14544 535 aa13.7□□□□□ -0.22
PRNP-201ENST00000379440 FMO6PO60774 539 aa13.7□□□□□ -0.22
PRNP-201ENST00000379440 LIMS3P0CW19 117 aa13.7□□□□□ -0.22
PRNP-201ENST00000379440 LIMS4P0CW20 117 aa13.7□□□□□ -0.22
PRNP-201ENST00000379440 CD1CP29017 333 aa13.7□□□□□ -0.22
PRNP-201ENST00000379440 RPS19P39019 145 aaKnown RBP13.7□□□□□ -0.22
PRNP-201ENST00000379440 PRKCDQ05655 676 aa13.7□□□□□ -0.22
PRNP-201ENST00000379440 PRAMEF17Q5VTA0 474 aa13.7□□□□□ -0.22
PRNP-201ENST00000379440 CPOQ8IVL8 374 aa13.7□□□□□ -0.22
PRNP-201ENST00000379440 FANK1Q8TC84 345 aa13.7□□□□□ -0.22
PRNP-201ENST00000379440 BPIFA2Q96DR5 249 aa13.7□□□□□ -0.22
PRNP-201ENST00000379440 KCNS3Q9BQ31 491 aa13.7□□□□□ -0.22
PRNP-201ENST00000379440 ASPNQ9BXN1 380 aa13.7□□□□□ -0.22
PRNP-201ENST00000379440 TEX12Q9BXU0 123 aa13.7□□□□□ -0.22
PRNP-201ENST00000379440 OR10A5Q9H207 317 aa13.7□□□□□ -0.22
PRNP-201ENST00000379440 TMEM27Q9HBJ8 222 aa13.7□□□□□ -0.22
PRNP-201ENST00000379440 DNAJB12Q9NXW2 375 aaKnown RBP13.7□□□□□ -0.22
PRNP-201ENST00000379440 CBLCQ9ULV8 474 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms