RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 ZNF10P21506 573 aaPredicted RBP10.04□□□□□ -0.8
NEDD9-201ENST00000379433 CBLP22681 906 aa10.04□□□□□ -0.8
NEDD9-201ENST00000379433 CD300CQ08708 224 aa10.04□□□□□ -0.8
NEDD9-201ENST00000379433 ATP1A4Q13733 1029 aa10.04□□□□□ -0.8
NEDD9-201ENST00000379433 PROX2Q3B8N5 592 aa10.04□□□□□ -0.8
NEDD9-201ENST00000379433 THEM4Q5T1C6 240 aa10.04□□□□□ -0.8
NEDD9-201ENST00000379433 NRMQ8IXM6 262 aa10.04□□□□□ -0.8
NEDD9-201ENST00000379433 OR52R1Q8NGF1 315 aa10.04□□□□□ -0.8
NEDD9-201ENST00000379433 OR4C15Q8NGM1 316 aa10.04□□□□□ -0.8
NEDD9-201ENST00000379433 FAM216AQ8WUB2 273 aa10.04□□□□□ -0.8
NEDD9-201ENST00000379433 TMEM255BQ8WV15 326 aa10.04□□□□□ -0.8
NEDD9-201ENST00000379433 PTCHD1Q96NR3 888 aa10.04□□□□□ -0.8
NEDD9-201ENST00000379433 ACTRT3Q9BYD9 372 aa10.04□□□□□ -0.8
NEDD9-201ENST00000379433 PLA2G12AQ9BZM1 189 aa10.04□□□□□ -0.8
NEDD9-201ENST00000379433 TRIM2Q9C040 744 aa10.04□□□□□ -0.8
NEDD9-201ENST00000379433 ZBTB20Q9HC78 741 aaPredicted RBP10.04□□□□□ -0.8
NEDD9-201ENST00000379433 TIGARQ9NQ88 270 aa10.04□□□□□ -0.8
NEDD9-201ENST00000379433 PNO1Q9NRX1 252 aaKnown RBP10.04□□□□□ -0.8
NEDD9-201ENST00000379433 SEMA4GQ9NTN9 838 aa10.04□□□□□ -0.8
NEDD9-201ENST00000379433 CLEC2DQ9UHP7 191 aa10.04□□□□□ -0.8
NEDD9-201ENST00000379433 ATXN7L1Q9ULK2 861 aaPredicted RBP10.04□□□□□ -0.8
NEDD9-201ENST00000379433 A4GNTQ9UNA3 340 aa10.04□□□□□ -0.8
NEDD9-201ENST00000379433 SLC22A7Q9Y694 548 aa10.04□□□□□ -0.8
NEDD9-201ENST00000379433 WWP2O00308 870 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 PDGFBP01127 241 aaPredicted RBP10.03□□□□□ -0.8
NEDD9-201ENST00000379433 PTHP01270 115 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 GSTM5P46439 218 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 RAB15P59190 212 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 GINS1Q14691 196 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 MFSD12Q6NUT3 480 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 SLCO6A1Q86UG4 719 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 RCBTB1Q8NDN9 531 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 HPS1Q92902 700 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 TP53INP1Q96A56 240 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 OR5M11Q96RB7 305 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 LIN7BQ9HAP6 207 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 KLHL28Q9NXS3 571 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 LRIT1Q9P2V4 623 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 OR10H1Q9Y4A9 318 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 RIF1Q5UIP0 2472 aaKnown RBP10.03□□□□□ -0.8
NEDD9-201ENST00000379433 PTPRZ1P23471 2315 aaPredicted RBP10.03□□□□□ -0.8
NEDD9-201ENST00000379433 MEX3AA1L020 520 aaKnown RBP10.03□□□□□ -0.8
NEDD9-201ENST00000379433 NADKO95544 446 aaPredicted RBP10.03□□□□□ -0.8
NEDD9-201ENST00000379433 HK1P19367 917 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 LIPAP38571 399 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 KEAP1Q14145 624 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 GALEQ14376 348 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 FAM76BQ5HYJ3 339 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 ENTPD8Q5MY95 495 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 JMJD6Q6NYC1 403 aaPredicted RBP10.03□□□□□ -0.8
NEDD9-201ENST00000379433 PRICKLE2Q7Z3G6 844 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 P2RY8Q86VZ1 359 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 PRR22Q8IZ63 422 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 ZFP41Q8N8Y5 198 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 C19orf47Q8N9M1 422 aaKnown RBP10.03□□□□□ -0.8
NEDD9-201ENST00000379433 OR52N1Q8NH53 320 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 GAL3ST4Q96RP7 486 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 LMF1Q96S06 567 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 TBX5Q99593 518 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 CDX2Q99626 313 aaPredicted RBP10.03□□□□□ -0.8
NEDD9-201ENST00000379433 PARD6GQ9BYG4 376 aaPredicted RBP10.03□□□□□ -0.8
NEDD9-201ENST00000379433 ALOXE3Q9BYJ1 711 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 C6orf62Q9GZU0 229 aaPredicted RBP10.03□□□□□ -0.8
NEDD9-201ENST00000379433 SAV1Q9H4B6 383 aaPredicted RBP10.03□□□□□ -0.8
NEDD9-201ENST00000379433 NARFLQ9H6Q4 476 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 ACOT13Q9NPJ3 140 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 LYARQ9NX58 379 aaKnown RBP10.03□□□□□ -0.8
NEDD9-201ENST00000379433 PHF11Q9UIL8 331 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 SLC7A7Q9UM01 511 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 GAB2Q9UQC2 676 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 DTX4Q9Y2E6 619 aa10.03□□□□□ -0.8
NEDD9-201ENST00000379433 A0A087WUU8 490 aa10.02□□□□□ -0.8
NEDD9-201ENST00000379433 KIR2DS5A0A0G2JLQ3 304 aa10.02□□□□□ -0.8
NEDD9-201ENST00000379433 A0A0G2JNG1 304 aa10.02□□□□□ -0.8
NEDD9-201ENST00000379433 KIR2DS3K7RE56 304 aa10.02□□□□□ -0.8
NEDD9-201ENST00000379433 CD63P08962 238 aa10.02□□□□□ -0.8
NEDD9-201ENST00000379433 SOX3P41225 446 aa10.02□□□□□ -0.8
NEDD9-201ENST00000379433 C21orf59P57076 290 aa10.02□□□□□ -0.8
NEDD9-201ENST00000379433 KIR2DS5Q14953 304 aa10.02□□□□□ -0.8
NEDD9-201ENST00000379433 ELOCQ15369 112 aa10.02□□□□□ -0.8
NEDD9-201ENST00000379433 SAPCD1Q5SSQ6 148 aa10.02□□□□□ -0.8
NEDD9-201ENST00000379433 PERM1Q5SV97 790 aa10.02□□□□□ -0.8
NEDD9-201ENST00000379433 ACSM5Q6NUN0 579 aa10.02□□□□□ -0.8
NEDD9-201ENST00000379433 PGBD2Q6P3X8 592 aa10.02□□□□□ -0.8
NEDD9-201ENST00000379433 C10orf90Q96M02 699 aa10.02□□□□□ -0.8
NEDD9-201ENST00000379433 NRSN2Q9GZP1 204 aa10.02□□□□□ -0.8
NEDD9-201ENST00000379433 TBC1D17Q9HA65 648 aa10.02□□□□□ -0.8
NEDD9-201ENST00000379433 THSD1Q9NS62 852 aa10.02□□□□□ -0.8
NEDD9-201ENST00000379433 RTTNQ86VV8 2226 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 AQP9O43315 295 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 ACP2P11117 423 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 ANXA11P50995 505 aaKnown RBP10.02□□□□□ -0.81
NEDD9-201ENST00000379433 UBE2IP63279 158 aaKnown RBP10.02□□□□□ -0.81
NEDD9-201ENST00000379433 BNC1Q01954 994 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 GXYLT1Q4G148 440 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 DESI1Q6ICB0 168 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 BTLAQ7Z6A9 289 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 GALNT11Q8NCW6 608 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 OR51A7Q8NH64 312 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 LHFPL5Q8TAF8 219 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms