RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 TBC1D20Q96BZ9 403 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 GON7Q9BXV9 100 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 AMBRA1Q9C0C7 1298 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 TAS2R16Q9NYV7 291 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 TMEM202A6NGA9 273 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 B8ZZF3 427 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 SLC16A6O15403 523 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 SLC6A8P48029 635 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 CSNK1EP49674 416 aaKnown RBP14.06□□□□□ -0.16
NPHP4-201ENST00000378156 CDKN3Q16667 212 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 BCL7AQ4VC05 210 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 PTCRAQ6ISU1 281 aaPredicted RBP14.06□□□□□ -0.16
NPHP4-201ENST00000378156 TMEM184AQ6ZMB5 413 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 ATG5Q9H1Y0 275 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 IKZF5Q9H5V7 419 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 SLC25A37Q9NYZ2 338 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 NAP1L6A6NFF2 107 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 AIFM1O95831 613 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 SFTPBP07988 381 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 GPX2P18283 190 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 FUT1P19526 365 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 ART1P52961 327 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 PRPS1P60891 318 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 HENMT1Q5T8I9 393 aaKnown RBP14.06□□□□□ -0.16
NPHP4-201ENST00000378156 FCRLBQ6BAA4 426 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 ACOT11Q8WXI4 607 aaPredicted RBP14.06□□□□□ -0.16
NPHP4-201ENST00000378156 OR5B12Q96R08 314 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 OR7D2Q96RA2 312 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 PHB2Q99623 299 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 URM1Q9BTM9 101 aaKnown RBP14.06□□□□□ -0.16
NPHP4-201ENST00000378156 CNOT2Q9NZN8 540 aaKnown RBP14.06□□□□□ -0.16
NPHP4-201ENST00000378156 WASF3Q9UPY6 502 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 HMX3A6NHT5 357 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 CLDN24A6NM45 220 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 AQP9O43315 295 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 PPP1R3DO95685 299 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 BMP4P12644 408 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 MECP2P51608 486 aaKnown RBP14.06□□□□□ -0.16
NPHP4-201ENST00000378156 SNRPD2P62316 118 aaKnown RBP14.06□□□□□ -0.16
NPHP4-201ENST00000378156 METTL11BQ5VVY1 283 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 TMPRSS12Q86WS5 348 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 ADOQ96SZ5 270 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 TREX2Q9BQ50 279 aaPredicted RBP14.06□□□□□ -0.16
NPHP4-201ENST00000378156 SAP130Q9H0E3 1048 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 SSC5DA1L4H1 1573 aa14.06□□□□□ -0.16
NPHP4-201ENST00000378156 A0A0G2JMP0 313 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 FAM227AF5H4B4 570 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 ERCC1P07992 297 aaPredicted RBP14.05□□□□□ -0.16
NPHP4-201ENST00000378156 NR4A2P43354 598 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 GALK2Q01415 458 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 DUSP6Q16828 381 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 CCNJQ5T5M9 372 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 OR4M2Q8NGB6 313 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 DUS3LQ96G46 650 aaKnown RBP14.05□□□□□ -0.16
NPHP4-201ENST00000378156 C1QTNF3Q9BXJ4 246 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 MMP28Q9H239 520 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 KLHL9Q9P2J3 617 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 SC5DO75845 299 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 PTHP01270 115 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 IFNA5P01569 189 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 UGT2B7P16662 529 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 RAB3BP20337 219 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 TUBG1P23258 451 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 ZNF91Q05481 1191 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 LIMS2Q7Z4I7 341 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 ENTHD1Q8IYW4 607 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 ARL14Q8N4G2 192 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 SLC38A5Q8WUX1 472 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 CROCCQ5TZA2 2017 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 FURINP09958 794 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 CYCSP99999 105 aaKnown RBP14.05□□□□□ -0.16
NPHP4-201ENST00000378156 NR0B2Q15466 257 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 CHRFAM7AQ494W8 412 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 ABHD17BQ5VST6 288 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 AGAP6Q5VW22 663 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 SSX6Q7RTT6 188 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 PARP16Q8N5Y8 322 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 AGAP4Q96P64 663 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 ZNF649Q9BS31 505 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 ZNF385DQ9H6B1 395 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 ZFP57Q9NU63 452 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 USP36Q9P275 1121 aaKnown RBP14.05□□□□□ -0.16
NPHP4-201ENST00000378156 ATXN7L1Q9ULK2 861 aaPredicted RBP14.05□□□□□ -0.16
NPHP4-201ENST00000378156 A6NCN8 305 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 OR2T1O43869 369 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 BRINP1O60477 761 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 DLX2Q07687 328 aaPredicted RBP14.05□□□□□ -0.16
NPHP4-201ENST00000378156 GSG1LQ6UXU4 331 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 ARL11Q969Q4 196 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 TCTN2Q96GX1 697 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 PGAM5Q96HS1 289 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 HRASLS5Q96KN8 279 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 PITX2Q99697 317 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 NIPSNAP1Q9BPW8 284 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 MKRN2Q9H000 416 aaKnown RBP14.05□□□□□ -0.16
NPHP4-201ENST00000378156 IL37Q9NZH6 218 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 SLC35A3Q9Y2D2 325 aa14.05□□□□□ -0.16
NPHP4-201ENST00000378156 SHROOM3Q8TF72 1996 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 DNAJB6O75190 326 aa14.04□□□□□ -0.16
NPHP4-201ENST00000378156 ZNF43P17038 809 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms