RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 GPR139Q6DWJ6 353 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 GET4Q7L5D6 327 aaPredicted RBP16.69■□□□□ 0.26
GNE-201ENST00000377902 OR2L5Q8NG80 312 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 KCTD12Q96CX2 325 aaKnown RBP16.69■□□□□ 0.26
GNE-201ENST00000377902 OR2M2Q96R28 347 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 CD180Q99467 661 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 CLDND1Q9NY35 253 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 CXXC1Q9P0U4 656 aaPredicted RBP16.69■□□□□ 0.26
GNE-201ENST00000377902 AUP1Q9Y679 476 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 ZNF593O00488 134 aaPredicted RBP16.69■□□□□ 0.26
GNE-201ENST00000377902 OR7A10O76100 309 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 CEBPBP17676 345 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 BMP7P18075 431 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 ID2Q02363 134 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 TP53I3Q53FA7 332 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 TMEM35AQ53FP2 167 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 PRAMEF8Q5VWM4 474 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 PRAMEF7Q5VXH5 474 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 PXKQ7Z7A4 578 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 TMIEQ8NEW7 156 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 OR52L1Q8NGH7 329 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 OR51L1Q8NGJ5 315 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 HMGB4Q8WW32 186 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 HS6ST2Q96MM7 605 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 CHIAQ9BZP6 476 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 ADGRL4Q9HBW9 690 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 TMEM74BQ9NUR3 256 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 ZNF224Q9NZL3 707 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 OR6C2Q9NZP2 312 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 PPIEQ9UNP9 301 aaKnown RBP16.69■□□□□ 0.26
GNE-201ENST00000377902 AK6Q9Y3D8 172 aaKnown RBP16.69■□□□□ 0.26
GNE-201ENST00000377902 ZNF780BQ9Y6R6 833 aa16.69■□□□□ 0.26
GNE-201ENST00000377902 PRR23D1E9PI22 279 aaPredicted RBP16.68■□□□□ 0.26
GNE-201ENST00000377902 G3V3Q6 166 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 PEX12O00623 359 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 GMDSO60547 372 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 SC5DO75845 299 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 PRR23D2P0DMB1 279 aaPredicted RBP16.68■□□□□ 0.26
GNE-201ENST00000377902 ITGB8P26012 769 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 RAB28P51157 221 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 SHC2P98077 582 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 CRMP1Q14194 572 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 KRT33BQ14525 404 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 ELAVL3Q14576 367 aaKnown RBP16.68■□□□□ 0.26
GNE-201ENST00000377902 ZNF234Q14588 700 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 TMEM65Q6PI78 240 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 OR2T35Q8NGX2 323 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 BRIX1Q8TDN6 353 aaKnown RBP16.68■□□□□ 0.26
GNE-201ENST00000377902 SMPDL3BQ92485 455 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 METTL17Q9H7H0 456 aaPredicted RBP16.68■□□□□ 0.26
GNE-201ENST00000377902 SYNDIG1Q9H7V2 258 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 USP36Q9P275 1121 aaKnown RBP16.68■□□□□ 0.26
GNE-201ENST00000377902 ZNF223Q9UK11 482 aaPredicted RBP16.68■□□□□ 0.26
GNE-201ENST00000377902 SATB2Q9UPW6 733 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 TRABD2BA6NFA1 517 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 ASGR2P07307 311 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 SBK2P0C263 348 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 SULT1A3P0DMM9 295 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 SULT1A4P0DMN0 295 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 SAGP10523 405 aaPredicted RBP16.68■□□□□ 0.26
GNE-201ENST00000377902 UBL4AP11441 157 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 SNTB2Q13425 540 aaKnown RBP16.68■□□□□ 0.26
GNE-201ENST00000377902 COL28A1Q2UY09 1125 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 TMEM52BQ4KMG9 183 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 MFSD12Q6NUT3 480 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 RBCK1Q9BYM8 510 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 WSB2Q9NYS7 404 aaPredicted RBP16.68■□□□□ 0.26
GNE-201ENST00000377902 KCMF1Q9P0J7 381 aa16.68■□□□□ 0.26
GNE-201ENST00000377902 MEIKINA0A087WXM9 373 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 SLC9A3R1O14745 358 aaPredicted RBP16.67■□□□□ 0.26
GNE-201ENST00000377902 PEPDP12955 493 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 PEBP1P30086 187 aaKnown RBP16.67■□□□□ 0.26
GNE-201ENST00000377902 PUDPQ08623 228 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 ADAMTSL4Q6UY14 1074 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 Q6ZTK2 550 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 KANSL1Q7Z3B3 1105 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 OR52E1Q8NGJ3 308 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 TMEM239Q8WW34 195 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 ADAMTS14Q8WXS8 1223 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 NR4A3Q92570 626 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 PITHD1Q9GZP4 211 aaPredicted RBP16.67■□□□□ 0.26
GNE-201ENST00000377902 SPRTNQ9H040 489 aaPredicted RBP16.67■□□□□ 0.26
GNE-201ENST00000377902 MRPL39Q9NYK5 338 aaKnown RBP16.67■□□□□ 0.26
GNE-201ENST00000377902 CALML5Q9NZT1 146 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 KCNE5Q9UJ90 142 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 PRR23AA6NEV1 266 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 CDK2AP1O14519 115 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 PCDH8O95206 1070 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 CSF2RAP15509 400 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 MAGEB1P43366 347 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 MMP15P51511 669 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 OR1Q1Q15612 314 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 AANATQ16613 207 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 TRMT12Q53H54 448 aaKnown RBP16.67■□□□□ 0.26
GNE-201ENST00000377902 FAAH2Q6GMR7 532 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 HEPHL1Q6MZM0 1159 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 TPRA1Q86W33 373 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 LNX2Q8N448 690 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 MOAP1Q96BY2 351 aa16.67■□□□□ 0.26
GNE-201ENST00000377902 NXPE2Q96DL1 559 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms