RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 PGAP2Q9UHJ9 254 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 RHBDD3Q9Y3P4 386 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 HSPB11Q9Y547 144 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 HS3ST3A1Q9Y663 406 aa12.75□□□□□ -0.37
GPC6-201ENST00000377047 MEGF11A6BM72 1044 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 SORBS2O94875 1100 aaKnown RBP12.74□□□□□ -0.37
GPC6-201ENST00000377047 TUBG1P23258 451 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 PCBD1P61457 104 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 ERVK-16P61578 105 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 SFRP4Q6FHJ7 346 aaPredicted RBP12.74□□□□□ -0.37
GPC6-201ENST00000377047 ASRGL1Q7L266 308 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 GPR148Q8TDV2 347 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 ZFPM2Q8WW38 1151 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 TOMM40LQ969M1 308 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 SYT11Q9BT88 431 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 NGBQ9NPG2 151 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 PLEKHM1Q9Y4G2 1056 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 GMEB1Q9Y692 573 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 CENPBD1B2RD01 187 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 HHLA1C9JL84 531 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 PTHP01270 115 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 GABRA2P47869 451 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 HLCSP50747 726 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 ZNF81P51508 661 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 MOB3CQ70IA8 216 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 PHOX2BQ99453 314 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 SYT3Q9BQG1 590 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 C1QTNF2Q9BXJ5 285 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 SLC25A18Q9H1K4 315 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 KCND3Q9UK17 655 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 NXT1Q9UKK6 140 aaKnown RBP12.74□□□□□ -0.37
GPC6-201ENST00000377047 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.74□□□□□ -0.37
GPC6-201ENST00000377047 TMEM184BQ9Y519 407 aaPredicted RBP12.74□□□□□ -0.37
GPC6-201ENST00000377047 ZNF264O43296 627 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 SSX5O60225 188 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 GPR50Q13585 617 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 ZNF77Q15935 545 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 MRPL2Q5T653 305 aaKnown RBP12.74□□□□□ -0.37
GPC6-201ENST00000377047 LSM14AQ8ND56 463 aaKnown RBP12.74□□□□□ -0.37
GPC6-201ENST00000377047 WFDC5Q8TCV5 224 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 ZC3H10Q96K80 434 aaKnown RBP12.74□□□□□ -0.37
GPC6-201ENST00000377047 SAP130Q9H0E3 1048 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 B3GNT3Q9Y2A9 372 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 PKD1L3Q7Z443 1732 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 TLCD2A6NGC4 264 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 F5H0A9 414 aaPredicted RBP12.74□□□□□ -0.37
GPC6-201ENST00000377047 LSM1O15116 133 aaKnown RBP12.74□□□□□ -0.37
GPC6-201ENST00000377047 PTH2RP49190 550 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 KCNJ10P78508 379 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 ADARB1P78563 741 aaKnown RBP12.74□□□□□ -0.37
GPC6-201ENST00000377047 SPHK1Q9NYA1 384 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 TMEM181Q9P2C4 612 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 PADI1Q9ULC6 663 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 AK6Q9Y3D8 172 aaKnown RBP12.74□□□□□ -0.37
GPC6-201ENST00000377047 GPR45Q9Y5Y3 372 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 WNT4P56705 351 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 ACTBP60709 375 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 ACTG1P63261 375 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 SIRPAP78324 504 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 PODNL1Q6PEZ8 512 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 PRSS48Q7RTY5 328 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 TXLNGYQ9BZA5 131 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 C6orf106Q9H6K1 298 aaPredicted RBP12.74□□□□□ -0.37
GPC6-201ENST00000377047 C1GALT1Q9NS00 363 aa12.74□□□□□ -0.37
GPC6-201ENST00000377047 MYH15Q9Y2K3 1946 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 KNG1P01042 644 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 CLDN17P56750 224 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 HBA1P69905 142 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 NKPD1Q17RQ9 610 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 COL28A1Q2UY09 1125 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 GSG1LQ6UXU4 331 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 FAM160A2Q8N612 972 aaPredicted RBP12.73□□□□□ -0.37
GPC6-201ENST00000377047 PIGCQ92535 297 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 TXNDC15Q96J42 360 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 ZNF223Q9UK11 482 aaPredicted RBP12.73□□□□□ -0.37
GPC6-201ENST00000377047 ADAM29Q9UKF5 820 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 M0R233 179 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 SMAD4Q13485 552 aaKnown RBP12.73□□□□□ -0.37
GPC6-201ENST00000377047 NTRK2Q16620 822 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 TBRG1Q3YBR2 411 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 TMEM150AQ86TG1 271 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 MARVELD2Q8N4S9 558 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 CCDC71LQ8N9Z2 235 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 GLYATL2Q8WU03 294 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 ACOT11Q8WXI4 607 aaPredicted RBP12.73□□□□□ -0.37
GPC6-201ENST00000377047 PDXPQ96GD0 296 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 ABCG5Q9H222 651 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 OR52D1Q9H346 318 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 SLX4Q8IY92 1834 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 GLSO94925 669 aaPredicted RBP12.73□□□□□ -0.37
GPC6-201ENST00000377047 F13BP05160 661 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 BMP4P12644 408 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 MYF6P23409 242 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 CXCR4P61073 352 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 C14orf28Q4W4Y0 310 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 NIPAL3Q6P499 406 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 SLC16A14Q7RTX9 510 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 BEST3Q8N1M1 668 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 TRUB1Q8WWH5 349 aaKnown RBP12.73□□□□□ -0.37
GPC6-201ENST00000377047 EMCNQ9ULC0 261 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms