RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 MED31Q9Y3C7 131 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 SLC22A7Q9Y694 548 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 ZNF860A6NHJ4 632 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 CTSVO60911 334 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 LDB3O75112 727 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 OR2B3O76000 313 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 SBK2P0C263 348 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 TFPIP10646 304 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 NPR2P20594 1047 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 AHCYP23526 432 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 RBMS1P29558 406 aaKnown RBP13.48□□□□□ -0.25
MSH5-201ENST00000375703 ACVR1BP36896 505 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 BTG1P62324 171 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 SHC2P98077 582 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 BTBD16Q32M84 506 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 FHL5Q5TD97 284 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 GARNL3Q5VVW2 1013 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 ENPP7Q6UWV6 458 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 PHOSPHO2Q8TCD6 241 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 SMAP2Q8WU79 429 aaPredicted RBP13.48□□□□□ -0.25
MSH5-201ENST00000375703 TMEM5Q9Y2B1 443 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 TRAV27A0A087WT01 109 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 POM121BA6NF01 834 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 RIIAD1A6NNX1 92 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 CLUP10909 449 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 NT5EP21589 574 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 NOS3P29474 1203 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 EVI2BP34910 448 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 OR12D2P58182 307 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 SNRPD2P62316 118 aaKnown RBP13.48□□□□□ -0.25
MSH5-201ENST00000375703 AMZ1Q400G9 498 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 CDRT4Q8N9R6 151 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 ARSGQ96EG1 525 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 SLC35A3Q9Y2D2 325 aa13.48□□□□□ -0.25
MSH5-201ENST00000375703 EEF1E1O43324 174 aaKnown RBP13.47□□□□□ -0.25
MSH5-201ENST00000375703 HTR2BP41595 481 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 TAS2R43P59537 309 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 PLA1AQ53H76 456 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 RPTNQ6XPR3 784 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 KRT74Q7RTS7 529 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 CYB561A3Q8NBI2 242 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 SMPDL3BQ92485 455 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 ABHD1Q96SE0 405 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 TMEM27Q9HBJ8 222 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 KLHL1Q9NR64 748 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 DUSP22Q9NRW4 184 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 ZMIZ1Q9ULJ6 1067 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 SATB2Q9UPW6 733 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 NCKAP1Q9Y2A7 1128 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 LOC105369274A0A096LPK9 316 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 FMO6PO60774 539 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 FZD7O75084 574 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 PTP4A3O75365 173 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 IL9P15248 144 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 ZNF10P21506 573 aaPredicted RBP13.47□□□□□ -0.25
MSH5-201ENST00000375703 ADPRHP54922 357 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 GPM6BQ13491 265 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 KIR2DS3Q14952 304 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 ACSM3Q53FZ2 586 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 FIGLAQ6QHK4 219 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 ABHD13Q7L211 337 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 OR4N4Q8N0Y3 316 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 SLC44A3Q8N4M1 653 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 C17orf47Q8NEP4 570 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 OR7G1Q8NGA0 311 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 CCL4L1Q8NHW4 92 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 TRMT10AQ8TBZ6 339 aaKnown RBP13.47□□□□□ -0.25
MSH5-201ENST00000375703 OR1E3Q8WZA6 343 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 SNAPC3Q92966 411 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 TRAF4Q9BUZ4 470 aaPredicted RBP13.47□□□□□ -0.25
MSH5-201ENST00000375703 SFXN1Q9H9B4 322 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 ERVMER34-1Q9H9K5 563 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 ADGRL4Q9HBW9 690 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 MEPEQ9NQ76 525 aaPredicted RBP13.47□□□□□ -0.25
MSH5-201ENST00000375703 FBXL4Q9UKA2 621 aa13.47□□□□□ -0.25
MSH5-201ENST00000375703 A0A0A6YYJ9 748 aa13.46□□□□□ -0.25
MSH5-201ENST00000375703 SLC9B1P1A6NJY1 282 aa13.46□□□□□ -0.25
MSH5-201ENST00000375703 NOTOA8MTQ0 251 aa13.46□□□□□ -0.25
MSH5-201ENST00000375703 HK1P19367 917 aa13.46□□□□□ -0.25
MSH5-201ENST00000375703 POLR2CP19387 275 aaPredicted RBP13.46□□□□□ -0.25
MSH5-201ENST00000375703 GABRA3P34903 492 aa13.46□□□□□ -0.25
MSH5-201ENST00000375703 ZNF85Q03923 595 aa13.46□□□□□ -0.25
MSH5-201ENST00000375703 CRMP1Q14194 572 aa13.46□□□□□ -0.25
MSH5-201ENST00000375703 PRRT3Q5FWE3 981 aa13.46□□□□□ -0.25
MSH5-201ENST00000375703 SHISA5Q8N114 240 aa13.46□□□□□ -0.25
MSH5-201ENST00000375703 CAMKVQ8NCB2 501 aa13.46□□□□□ -0.25
MSH5-201ENST00000375703 FLVCR1-AS1Q8TAF5 88 aa13.46□□□□□ -0.25
MSH5-201ENST00000375703 GRHL3Q8TE85 626 aa13.46□□□□□ -0.25
MSH5-201ENST00000375703 USP36Q9P275 1121 aaKnown RBP13.46□□□□□ -0.25
MSH5-201ENST00000375703 HSPB11Q9Y547 144 aa13.46□□□□□ -0.25
MSH5-201ENST00000375703 CACNG2Q9Y698 323 aa13.46□□□□□ -0.25
MSH5-201ENST00000375703 A0A087WV62 115 aa13.46□□□□□ -0.26
MSH5-201ENST00000375703 A0A0G2JK05 382 aa13.46□□□□□ -0.26
MSH5-201ENST00000375703 FGF17O60258 216 aa13.46□□□□□ -0.26
MSH5-201ENST00000375703 RFPL3O75679 317 aa13.46□□□□□ -0.26
MSH5-201ENST00000375703 DHFRP00374 187 aa13.46□□□□□ -0.26
MSH5-201ENST00000375703 GYPBP06028 91 aa13.46□□□□□ -0.26
MSH5-201ENST00000375703 ZNF3P17036 446 aa13.46□□□□□ -0.26
MSH5-201ENST00000375703 PYCR1P32322 319 aa13.46□□□□□ -0.26
MSH5-201ENST00000375703 GPLD1P80108 840 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms