RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 LAMB1P07942 1786 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 SLC43A1O75387 559 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 RAD51DO75771 328 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 AIFM1O95831 613 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 DCNP07585 359 aaKnown RBP10.8□□□□□ -0.68
PTCH1-203ENST00000375274 AKAIN1P0CW23 69 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 RAP2BP61225 183 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 NLRP8Q86W28 1048 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 RIMKLAQ8IXN7 391 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 NEDD4LQ96PU5 975 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 EIF5A2Q9GZV4 153 aaKnown RBP10.8□□□□□ -0.68
PTCH1-203ENST00000375274 RNF167Q9H6Y7 350 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 NIPAL2Q9H841 368 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 B3GAT2Q9NPZ5 323 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 POLHQ9Y253 713 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 YARS2Q9Y2Z4 477 aaKnown RBP10.8□□□□□ -0.68
PTCH1-203ENST00000375274 COL22A1Q8NFW1 1626 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-203ENST00000375274 F8W036 122 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 RDH16O75452 317 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 CLUP10909 449 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 SNRPBP14678 240 aaKnown RBP10.8□□□□□ -0.68
PTCH1-203ENST00000375274 CR2P20023 1033 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 SHC1P29353 583 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 BLOC1S1P78537 153 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 GRM7Q14831 915 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 CDK10Q15131 360 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 SLC6A19Q695T7 634 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 FCRLAQ7L513 359 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 DEFB119Q8N690 84 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 OR52I1Q8NGK6 324 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 APOOQ9BUR5 198 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 BTBD2Q9BX70 525 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 MS4A8Q9BY19 250 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 MED20Q9H944 212 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 PLAC1Q9HBJ0 212 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 APMAPQ9HDC9 416 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 PRDM9Q9NQV7 894 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 PLCXD1Q9NUJ7 323 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 C2orf42Q9NWW7 574 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 MYEF2Q9P2K5 600 aaKnown RBP10.8□□□□□ -0.68
PTCH1-203ENST00000375274 CYP8B1Q9UNU6 501 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 HIF3AQ9Y2N7 669 aa10.8□□□□□ -0.68
PTCH1-203ENST00000375274 VSTM2BA6NLU5 285 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 KLK8O60259 260 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 PEX14O75381 377 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 HEXBP07686 556 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 RAB40ALP0C0E4 278 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 BMP1P13497 986 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 NPPBP16860 134 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 PSMB1P20618 241 aaKnown RBP10.79□□□□□ -0.68
PTCH1-203ENST00000375274 CCNOP22674 350 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 GBX1Q14549 363 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 EXOSC7Q15024 291 aaKnown RBP10.79□□□□□ -0.68
PTCH1-203ENST00000375274 NSDHLQ15738 373 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 MRPL2Q5T653 305 aaKnown RBP10.79□□□□□ -0.68
PTCH1-203ENST00000375274 LYPD4Q6UWN0 246 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 APOOLQ6UXV4 268 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 ZSCAN1Q8NBB4 408 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 OR5K2Q8NHB8 316 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 GIMAP1Q8WWP7 306 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 RAB40AQ8WXH6 277 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 KIAA1143Q96AT1 154 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-203ENST00000375274 ACTR10Q9NZ32 417 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 MEIS3P1A6NDR6 274 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 A8MVJ9 347 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 TMX2-CTNND1H3BSU7 103 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 B3GALT4O96024 378 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 SERTAD2Q14140 314 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 PHF19Q5T6S3 580 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 NXNL2Q5VZ03 156 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 FAM71E1Q6IPT2 247 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 SLC39A5Q6ZMH5 540 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 PXKQ7Z7A4 578 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 OR7G1Q8NGA0 311 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 OR13C2Q8NGS9 318 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 WFDC5Q8TCV5 224 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 GHSRQ92847 366 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 ZNF385DQ9H6B1 395 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 SIDT1Q9NXL6 827 aaKnown RBP10.79□□□□□ -0.68
PTCH1-203ENST00000375274 CST5P28325 142 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-203ENST00000375274 SNRPGP62308 76 aaKnown RBP10.79□□□□□ -0.68
PTCH1-203ENST00000375274 GALEQ14376 348 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 RNF113BQ8IZP6 322 aaKnown RBP10.79□□□□□ -0.68
PTCH1-203ENST00000375274 ZNF296Q8WUU4 475 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-203ENST00000375274 BMFQ96LC9 184 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 INTS14Q96SY0 518 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 PARPBPQ9NWS1 579 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 PPP4R1LQ9P1A2 415 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 TRDV1A0A1B0GX56 115 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 TCRBV21S2A2A0A5A6 115 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 FAM221BA6H8Z2 402 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 ANKRD33BA6NCL7 494 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 GNRHRP30968 328 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 AQP6Q13520 282 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 PDE7AQ13946 482 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 CARD17Q5XLA6 110 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 SFXN4Q6P4A7 337 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 RPL22L1Q6P5R6 122 aaKnown RBP10.79□□□□□ -0.68
PTCH1-203ENST00000375274 GDPD3Q7L5L3 318 aa10.79□□□□□ -0.68
PTCH1-203ENST00000375274 ARL11Q969Q4 196 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms