RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 DPH1Q9BZG8 443 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 KLHL31Q9H511 634 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 BRD7Q9NPI1 651 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 NLGN3Q9NZ94 848 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 OR6C2Q9NZP2 312 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 SCP2D1Q9UJQ7 156 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 SLC7A7Q9UM01 511 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 HEATR5BQ9P2D3 2071 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 A0A0A6YYD5 115 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 A0A1W2PRG6 482 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 MAN2B1O00754 1011 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 MT-ND5P03915 603 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 ANKRD34CP0C6C1 535 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 SULT1A3P0DMM9 295 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 SULT1A4P0DMN0 295 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 RAB3BP20337 219 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 TSPAN5P62079 268 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 ELAVL3Q14576 367 aaKnown RBP10.3□□□□□ -0.76
CCDC40-203ENST00000374877 SLC9A5Q14940 896 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 DECR1Q16698 335 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 SFRP4Q6FHJ7 346 aaPredicted RBP10.3□□□□□ -0.76
CCDC40-203ENST00000374877 MBOAT2Q6ZWT7 520 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 MEPCEQ7L2J0 689 aaKnown RBP10.3□□□□□ -0.76
CCDC40-203ENST00000374877 MS4A15Q8N5U1 240 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 ZNF514Q96K75 400 aaPredicted RBP10.3□□□□□ -0.76
CCDC40-203ENST00000374877 C4orf36Q96KX1 117 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 OR52D1Q9H346 318 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 C8orf33Q9H7E9 229 aaPredicted RBP10.3□□□□□ -0.76
CCDC40-203ENST00000374877 TM7SF3Q9NS93 570 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 COPZ2Q9P299 210 aa10.3□□□□□ -0.76
CCDC40-203ENST00000374877 A0A0G2JK05 382 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 A0A1W2PPL8 197 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 C2CD4DB7Z1M9 353 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 ERI3O43414 337 aaKnown RBP10.29□□□□□ -0.76
CCDC40-203ENST00000374877 HPXP02790 462 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 THY1P04216 161 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 WNT1P04628 370 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 RRASP10301 218 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 C6P13671 934 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 SELENOPP49908 381 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 CLDN2P57739 230 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 PRR5P85299 388 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 C6orf132Q5T0Z8 1188 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 FCRLBQ6BAA4 426 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 KANSL1Q7Z3B3 1105 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 LRRTM4Q86VH4 590 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 AMZ2Q86W34 360 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 GPALPP1Q8IXQ4 340 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 OR56A1Q8NGH5 318 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 OR52L1Q8NGH7 329 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 ERMAPQ96PL5 475 aaPredicted RBP10.29□□□□□ -0.76
CCDC40-203ENST00000374877 TIMP4Q99727 224 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 PHF7Q9BWX1 381 aaPredicted RBP10.29□□□□□ -0.76
CCDC40-203ENST00000374877 SLC23A2Q9UGH3 650 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 FLVCR2Q9UPI3 526 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 ATG4BQ9Y4P1 393 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 C17orf113A0A1B0GUU1 675 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 LRRN3E7EW58 273 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 UBL3O95164 117 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 ACSM3Q53FZ2 586 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 HACD4Q5VWC8 232 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 C18orf63Q68DL7 685 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 SRFBP1Q8NEF9 429 aaKnown RBP10.29□□□□□ -0.76
CCDC40-203ENST00000374877 NUP43Q8NFH3 380 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 OR9A2Q8NGT5 310 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 FANK1Q8TC84 345 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 RBPMSQ93062 196 aaKnown RBP10.29□□□□□ -0.76
CCDC40-203ENST00000374877 ORAI3Q9BRQ5 295 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 GSX2Q9BZM3 304 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 TMEM168Q9H0V1 697 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 LRRN3Q9H3W5 708 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 AUNIPQ9H7T9 357 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 WASH6PQ9NQA3 447 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 HCN3Q9P1Z3 774 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 TCF20Q9UGU0 1960 aaKnown RBP10.29□□□□□ -0.76
CCDC40-203ENST00000374877 A0A1W2PR48 441 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 TRABD2BA6NFA1 517 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 J3QRE1 110 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 SERPINI2O75830 405 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 BMP7P18075 431 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 PYCR1P32322 319 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 PDX1P52945 283 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 BLVRAP53004 296 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 OR12D2P58182 307 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 ZP1P60852 638 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 SHC2P98077 582 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 PRPF38BQ5VTL8 546 aaKnown RBP10.29□□□□□ -0.76
CCDC40-203ENST00000374877 TMEM64Q6YI46 380 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 BTN2A1Q7KYR7 527 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 HDDC2Q7Z4H3 204 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 FGD2Q7Z6J4 655 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 TPRA1Q86W33 373 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 ZNF671Q8TAW3 534 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 NR4A3Q92570 626 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 DDOQ99489 341 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 ZNF436Q9C0F3 470 aaPredicted RBP10.29□□□□□ -0.76
CCDC40-203ENST00000374877 ENKD1Q9H0I2 346 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 ADAM29Q9UKF5 820 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 SCML1Q9UN30 329 aa10.29□□□□□ -0.76
CCDC40-203ENST00000374877 STON1Q9Y6Q2 735 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms