RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 OR10A4Q9H209 315 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 NUP50Q9UKX7 468 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 SMAD9O15198 467 aaKnown RBP11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 AMY2AP04746 511 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 PLK5Q496M5 336 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 LRRC37A5PQ49AS3 106 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 ENTHD1Q8IYW4 607 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 OR4F15Q8NGB8 312 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 TCTN2Q96GX1 697 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 DHRS1Q96LJ7 313 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 SIAEQ9HAT2 523 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 WASF3Q9UPY6 502 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 CACNG2Q9Y698 323 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 TRBV5-4A0A0C4DH59 114 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 FAM171A2A8MVW0 826 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 H7C417 338 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 SBK3P0C264 359 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 CD6P30203 668 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 OPRD1P41143 372 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 DPTQ07507 201 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 ZNF77Q15935 545 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 COL28A1Q2UY09 1125 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 COX20Q5RI15 118 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 TMEM244Q5VVB8 128 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 ANKRD54Q6NXT1 300 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 SLC48A1Q6P1K1 146 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 STOML3Q8TAV4 291 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 CHPT1Q8WUD6 406 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 C16orf58Q96GQ5 468 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 STARD5Q9NSY2 213 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 FTSJ1Q9UET6 329 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 V9GY05 133 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 H3BQ06 376 aaPredicted RBP11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 SCG5P05408 212 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 UGT2B7P16662 529 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 ARRB2P32121 409 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 PTH2RP49190 550 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 HSF5Q4G112 596 aaPredicted RBP11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 SLX4IPQ5VYV7 408 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 TMEM64Q6YI46 380 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 MBOAT2Q6ZWT7 520 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 LIMS2Q7Z4I7 341 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 CLDN22Q8N7P3 220 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 NAXEQ8NCW5 288 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 COQ8AQ8NI60 647 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 SLC5A7Q9GZV3 580 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 MRPL15Q9P015 296 aaKnown RBP11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 RASD1Q9Y272 281 aa11.08□□□□□ -0.64
DEPDC1-201ENST00000370966 TRAV27A0A087WT01 109 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 FXYD1O00168 92 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 BRINP1O60477 761 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 PTHP01270 115 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 ELAVL4P26378 380 aaKnown RBP11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 PER3P56645 1201 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 ISL1P61371 349 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 MBTPS1Q14703 1052 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 DEFB133Q30KQ1 61 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 OR2G6Q5TZ20 316 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 TRIM43Q96BQ3 446 aaPredicted RBP11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 EGLN3Q9H6Z9 239 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 PPT2Q9UMR5 302 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 DIMT1Q9UNQ2 313 aaKnown RBP11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 HIF3AQ9Y2N7 669 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 MEIOCA2RUB1 952 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 LINC01553A4QN01 128 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 FZD6O60353 706 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 HOXD12P35452 270 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 PIGAP37287 484 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 SLC1A3P43003 542 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 HTRA3P83110 453 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 RPL22L1Q6P5R6 122 aaKnown RBP11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 PHC2Q8IXK0 858 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 CNOT9Q92600 299 aaKnown RBP11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 PDXPQ96GD0 296 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 NECAB3Q96P71 396 aaPredicted RBP11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 TMEM168Q9H0V1 697 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 SIDT1Q9NXL6 827 aaKnown RBP11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 HHLA2Q9UM44 414 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 HMX3A6NHT5 357 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 PLPP1O14494 284 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 CXCL10P02778 98 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 MCCD1P59942 119 aaPredicted RBP11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 MANEAQ5SRI9 462 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 NXNL2Q5VZ03 156 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 IL22RA1Q8N6P7 574 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 TMEM185BQ9H7F4 350 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 TAS2R3Q9NYW6 316 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 KCNN3Q9UGI6 736 aa11.07□□□□□ -0.64
DEPDC1-201ENST00000370966 CXorf51AA0A1B0GTR3 108 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 SFTPBP07988 381 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 CSF1P09603 554 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 SMIM18P0DKX4 95 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 PBX2P40425 430 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 FNTBP49356 437 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 EIF2B1Q14232 305 aaKnown RBP11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 GNMTQ14749 295 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 PCGF3Q3KNV8 242 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 EEF1A1P5Q5VTE0 462 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 KIAA0895LQ68EN5 471 aa11.06□□□□□ -0.64
DEPDC1-201ENST00000370966 SLC35F3Q8IY50 421 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms