RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 HNRNPCL2B2RXH8 293 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 HNRNPCL3B7ZW38 293 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 G3V2T6 193 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 EI24O14681 340 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 ADAMDEC1O15204 470 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 E2F6O75461 281 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 OPN1SWP03999 348 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 TK1P04183 234 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 GRPP07492 148 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 RPSAP08865 295 aaKnown RBP8.08□□□□□ -1.12
TPM3-213ENST00000368545 HNRNPCL4P0DMR1 293 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 GALNSP34059 522 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 ALDH3A2P51648 485 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 MRPS35P82673 323 aaKnown RBP8.08□□□□□ -1.12
TPM3-213ENST00000368545 EPS8Q12929 822 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 GK3PQ14409 553 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 TSTQ16762 297 aaKnown RBP8.08□□□□□ -1.12
TPM3-213ENST00000368545 FAM111BQ6SJ93 734 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 TTLL10Q6ZVT0 673 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 C16orf62Q7Z3J2 963 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 ARHGAP22Q7Z5H3 698 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 STK32CQ86UX6 486 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 OR51Q1Q8NH59 317 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 ADAMTS15Q8TE58 950 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 PROX1Q92786 737 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 CTHRC1Q96CG8 243 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 NRBF2Q96F24 287 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 NEIL1Q96FI4 390 aaPredicted RBP8.08□□□□□ -1.12
TPM3-213ENST00000368545 TRNT1Q96Q11 434 aaKnown RBP8.08□□□□□ -1.12
TPM3-213ENST00000368545 SLC29A1Q99808 456 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 EQTNQ9NQ60 294 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 FGF21Q9NSA1 209 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 GIN1Q9NXP7 522 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 SMPD3Q9NY59 655 aaPredicted RBP8.08□□□□□ -1.12
TPM3-213ENST00000368545 NKIRAS2Q9NYR9 191 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 MAT2BQ9NZL9 334 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 SEC14L3Q9UDX4 400 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 SLC45A2Q9UMX9 530 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 ABCG2Q9UNQ0 655 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 MMACHCQ9Y4U1 282 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 hCG_2039718K7EN88 272 aa8.07□□□□□ -1.12
TPM3-213ENST00000368545 PDLIM1O00151 329 aa8.07□□□□□ -1.12
TPM3-213ENST00000368545 MFN2O95140 757 aa8.07□□□□□ -1.12
TPM3-213ENST00000368545 AK1P00568 194 aa8.07□□□□□ -1.12
TPM3-213ENST00000368545 PTGER1P34995 402 aa8.07□□□□□ -1.12
TPM3-213ENST00000368545 GATA4P43694 442 aa8.07□□□□□ -1.12
TPM3-213ENST00000368545 XCR1P46094 333 aa8.07□□□□□ -1.12
TPM3-213ENST00000368545 POU6F2P78424 691 aaPredicted RBP8.07□□□□□ -1.12
TPM3-213ENST00000368545 ID2Q02363 134 aa8.07□□□□□ -1.12
TPM3-213ENST00000368545 MAPK11Q15759 364 aa8.07□□□□□ -1.12
TPM3-213ENST00000368545 SYPL1Q16563 259 aa8.07□□□□□ -1.12
TPM3-213ENST00000368545 SHQ1Q6PI26 577 aaKnown RBP8.07□□□□□ -1.12
TPM3-213ENST00000368545 CDRT4Q8N9R6 151 aa8.07□□□□□ -1.12
TPM3-213ENST00000368545 OR10Q1Q8NGQ4 319 aa8.07□□□□□ -1.12
TPM3-213ENST00000368545 RBM18Q96H35 190 aaKnown RBP8.07□□□□□ -1.12
TPM3-213ENST00000368545 C7orf34Q96L11 122 aa8.07□□□□□ -1.12
TPM3-213ENST00000368545 DGAT2Q96PD7 388 aa8.07□□□□□ -1.12
TPM3-213ENST00000368545 GFM1Q96RP9 751 aaKnown RBP8.07□□□□□ -1.12
TPM3-213ENST00000368545 STACQ99469 402 aa8.07□□□□□ -1.12
TPM3-213ENST00000368545 EPYCQ99645 322 aa8.07□□□□□ -1.12
TPM3-213ENST00000368545 RBM4BQ9BQ04 359 aaKnown RBP8.07□□□□□ -1.12
TPM3-213ENST00000368545 RBM4Q9BWF3 364 aaKnown RBP8.07□□□□□ -1.12
TPM3-213ENST00000368545 MS4A7Q9GZW8 240 aaPredicted RBP8.07□□□□□ -1.12
TPM3-213ENST00000368545 TRIM45Q9H8W5 580 aaPredicted RBP8.07□□□□□ -1.12
TPM3-213ENST00000368545 REEP1Q9H902 201 aa8.07□□□□□ -1.12
TPM3-213ENST00000368545 TPSG1Q9NRR2 321 aa8.07□□□□□ -1.12
TPM3-213ENST00000368545 DUSP22Q9NRW4 184 aa8.07□□□□□ -1.12
TPM3-213ENST00000368545 SATB2Q9UPW6 733 aa8.07□□□□□ -1.12
TPM3-213ENST00000368545 DSPPQ9NZW4 1301 aa8.07□□□□□ -1.12
TPM3-213ENST00000368545 IGHV5-10-1A0A0J9YXX1 117 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 CDRT15L2A8MXV6 281 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 CASC3O15234 703 aaKnown RBP8.06□□□□□ -1.12
TPM3-213ENST00000368545 FBLP22087 321 aaKnown RBP8.06□□□□□ -1.12
TPM3-213ENST00000368545 DCTP40126 519 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 MAT1AQ00266 395 aaKnown RBP8.06□□□□□ -1.12
TPM3-213ENST00000368545 FUT5Q11128 374 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 TRA2AQ13595 282 aaKnown RBP eCLIP8.06□□□□□ -1.12
TPM3-213ENST00000368545 RFX4Q33E94 735 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 GPAT3Q53EU6 434 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 TRMT12Q53H54 448 aaKnown RBP8.06□□□□□ -1.12
TPM3-213ENST00000368545 HEPHL1Q6MZM0 1159 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 RHBDD2Q6NTF9 364 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 QSOX2Q6ZRP7 698 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 TMPRSS9Q7Z410 1059 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 MARVELD2Q8N4S9 558 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 MIB2Q96AX9 1013 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 FKBP10Q96AY3 582 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 C16orf58Q96GQ5 468 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 ZNF354BQ96LW1 612 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 COL21A1Q96P44 957 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 GABARAPL1Q9H0R8 117 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 SYNDIG1Q9H7V2 258 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 CXorf21Q9HAI6 301 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 CACYBPQ9HB71 228 aaKnown RBP8.06□□□□□ -1.12
TPM3-213ENST00000368545 ZNF304Q9HCX3 659 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 ADAP2Q9NPF8 381 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 USE1Q9NZ43 259 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 SLC5A6Q9Y289 635 aa8.06□□□□□ -1.12
TPM3-213ENST00000368545 TMEM184BQ9Y519 407 aaPredicted RBP8.06□□□□□ -1.12
TPM3-213ENST00000368545 USP9XQ93008 2570 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms