RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 C16orf62Q7Z3J2 963 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 ZNF611Q8N823 705 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 VPS37AQ8NEZ2 397 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 OR5AK3PQ8NH89 298 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 GPR119Q8TDV5 335 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 TMEM234Q8WY98 164 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 ST8SIA1Q92185 356 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 SLC35G5Q96KT7 338 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 SRXN1Q9BYN0 137 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 ESRP2Q9H6T0 727 aaKnown RBP13.22□□□□□ -0.29
CTSD-202ENST00000367196 SERINC1Q9NRX5 453 aa13.22□□□□□ -0.29
CTSD-202ENST00000367196 RNF103-CHMP3A0A140T963 221 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 NPIPB9F8W1W9 429 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 H7C1Q1 480 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 TYROBPO43914 113 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 MYZAPP0CAP1 466 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 NID1P14543 1247 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 PAX1P15863 534 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 QPRTQ15274 297 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 DPY19L1Q2PZI1 675 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.21□□□□□ -0.29
CTSD-202ENST00000367196 PDZK1Q5T2W1 519 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 ATAD3BQ5T9A4 648 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 ANXA8L1Q5VT79 327 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 C22orf34Q6ZV56 151 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 TUSC5Q8IXB3 177 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 GABRG1Q8N1C3 465 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 OR5D16Q8NGK9 328 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 RFWD2Q8NHY2 731 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 AENQ8WTP8 325 aaKnown RBP13.21□□□□□ -0.29
CTSD-202ENST00000367196 SLC25A43Q8WUT9 341 aaPredicted RBP13.21□□□□□ -0.29
CTSD-202ENST00000367196 HSD17B8Q92506 261 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 KISS1RQ969F8 398 aaPredicted RBP13.21□□□□□ -0.29
CTSD-202ENST00000367196 S100PBPQ96BU1 408 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 SDF2Q99470 211 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 SMR3AQ99954 134 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 TMEM204Q9BSN7 226 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 TMEM109Q9BVC6 243 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 COQ10BQ9H8M1 238 aa13.21□□□□□ -0.29
CTSD-202ENST00000367196 SPIN1Q9Y657 262 aaPredicted RBP13.21□□□□□ -0.29
CTSD-202ENST00000367196 SERINC4A6NH21 518 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 ETV2O00321 342 aaPredicted RBP13.2□□□□□ -0.3
CTSD-202ENST00000367196 BIRC5O15392 142 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 GCM2O75603 506 aaPredicted RBP13.2□□□□□ -0.3
CTSD-202ENST00000367196 NTN1O95631 604 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 SERPINE1P05121 402 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 FESP07332 822 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 GUSBP08236 651 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 PGCP20142 388 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 ENPP1P22413 925 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 SHC1P29353 583 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 ARRB2P32121 409 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 ETV4P43268 484 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 CLNS1AP54105 237 aaKnown RBP13.2□□□□□ -0.3
CTSD-202ENST00000367196 CSNK2A1P68400 391 aaPredicted RBP13.2□□□□□ -0.3
CTSD-202ENST00000367196 GPR68Q15743 365 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 ZNF141Q15928 474 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 PDCD2Q16342 344 aaPredicted RBP13.2□□□□□ -0.3
CTSD-202ENST00000367196 ARHGAP11BQ3KRB8 267 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 SFRP5Q5T4F7 317 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 WDR93Q6P2C0 686 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 EIF3MQ7L2H7 374 aaKnown RBP13.2□□□□□ -0.3
CTSD-202ENST00000367196 C6orf120Q7Z4R8 191 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 LRRC34Q8IZ02 419 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 ATP6V1C2Q8NEY4 427 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 OR8J2Q8NGG1 315 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 OR4A15Q8NGL6 344 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 POTEKPQ9BYX7 375 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 DPY30Q9C005 99 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 LAT2Q9GZY6 243 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 BCO1Q9HAY6 547 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 SSU72Q9NP77 194 aaKnown RBP13.2□□□□□ -0.3
CTSD-202ENST00000367196 POLE3Q9NRF9 147 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 SLC35A3Q9Y2D2 325 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 RNF115Q9Y4L5 304 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 KCNE3Q9Y6H6 103 aa13.2□□□□□ -0.3
CTSD-202ENST00000367196 ANKRD28O15084 1053 aa13.19□□□□□ -0.3
CTSD-202ENST00000367196 TM9SF1O15321 606 aa13.19□□□□□ -0.3
CTSD-202ENST00000367196 RGS16O15492 202 aaPredicted RBP13.19□□□□□ -0.3
CTSD-202ENST00000367196 OIP5O43482 229 aa13.19□□□□□ -0.3
CTSD-202ENST00000367196 CYP7B1O75881 506 aa13.19□□□□□ -0.3
CTSD-202ENST00000367196 CSTAP01040 98 aa13.19□□□□□ -0.3
CTSD-202ENST00000367196 CD3EP07766 207 aa13.19□□□□□ -0.3
CTSD-202ENST00000367196 RNF144AP50876 292 aaPredicted RBP13.19□□□□□ -0.3
CTSD-202ENST00000367196 ABCE1P61221 599 aaKnown RBP13.19□□□□□ -0.3
CTSD-202ENST00000367196 HPCAP84074 193 aa13.19□□□□□ -0.3
CTSD-202ENST00000367196 SKP2Q13309 424 aa13.19□□□□□ -0.3
CTSD-202ENST00000367196 ITGADQ13349 1161 aa13.19□□□□□ -0.3
CTSD-202ENST00000367196 CAPRIN1Q14444 709 aaKnown RBP13.19□□□□□ -0.3
CTSD-202ENST00000367196 TOMM34Q15785 309 aaPredicted RBP13.19□□□□□ -0.3
CTSD-202ENST00000367196 NDUFAF6Q330K2 333 aa13.19□□□□□ -0.3
CTSD-202ENST00000367196 KRT71Q3SY84 523 aa13.19□□□□□ -0.3
CTSD-202ENST00000367196 TIGD2Q4W5G0 525 aa13.19□□□□□ -0.3
CTSD-202ENST00000367196 OR4F3Q6IEY1 312 aa13.19□□□□□ -0.3
CTSD-202ENST00000367196 ALKBH2Q6NS38 261 aa13.19□□□□□ -0.3
CTSD-202ENST00000367196 ADAM5Q6NVV9 412 aa13.19□□□□□ -0.3
CTSD-202ENST00000367196 Q6ZT83 130 aa13.19□□□□□ -0.3
CTSD-202ENST00000367196 Q71RC1 249 aaPredicted RBP13.19□□□□□ -0.3
CTSD-202ENST00000367196 NUFIP2Q7Z417 695 aaKnown RBP13.19□□□□□ -0.3
CTSD-202ENST00000367196 MIPOL1Q8TD10 442 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms