RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 NEFHP12036 1026 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 ZNF10P21506 573 aaPredicted RBP7.14□□□□□ -1.27
YBX3-204ENST00000366290 HIST1H1TP22492 207 aaPredicted RBP7.14□□□□□ -1.27
YBX3-204ENST00000366290 ATP5A1P25705 553 aaKnown RBP7.14□□□□□ -1.27
YBX3-204ENST00000366290 TSFMP43897 325 aaKnown RBP7.14□□□□□ -1.27
YBX3-204ENST00000366290 RPL14P50914 215 aaKnown RBP7.14□□□□□ -1.27
YBX3-204ENST00000366290 MTTPP55157 894 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 BTN3A2P78410 334 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 PHEXP78562 749 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 EEF1A2Q05639 463 aaKnown RBP7.14□□□□□ -1.27
YBX3-204ENST00000366290 KIAA0040Q15053 153 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 NSDHLQ15738 373 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 EXT1Q16394 746 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 SMN1Q16637 294 aaKnown RBP7.14□□□□□ -1.27
YBX3-204ENST00000366290 ZNF766Q5HY98 468 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 OR4C11Q6IEV9 310 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 RPUSD3Q6P087 351 aaKnown RBP7.14□□□□□ -1.27
YBX3-204ENST00000366290 FAM180BQ6P0A1 224 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 TRIM40Q6P9F5 258 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 LANCL3Q6ZV70 420 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 ARMC8Q8IUR7 673 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 CA13Q8N1Q1 262 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 ZCCHC7Q8N3Z6 543 aaKnown RBP7.14□□□□□ -1.27
YBX3-204ENST00000366290 GBP7Q8N8V2 638 aaPredicted RBP7.14□□□□□ -1.27
YBX3-204ENST00000366290 ACOT4Q8N9L9 421 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 TNIP2Q8NFZ5 429 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 M1APQ8TC57 530 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 LRRC8CQ8TDW0 803 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 FCRL1Q96LA6 429 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 C7orf26Q96N11 449 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 SERINC2Q96SA4 455 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 TBCDQ9BTW9 1192 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 DDX31Q9H8H2 851 aaKnown RBP7.14□□□□□ -1.27
YBX3-204ENST00000366290 VPS29Q9UBQ0 182 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 GIMAP2Q9UG22 337 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 DHDHQ9UQ10 334 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 MMACHCQ9Y4U1 282 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 CSAG2Q9Y5P2 127 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 CRYBG3Q68DQ2 2970 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 LRBAP50851 2863 aa7.14□□□□□ -1.27
YBX3-204ENST00000366290 IGHV3-20A0A0C4DH32 117 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 DPPA5A6NC42 116 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 SYNDIG1LA6NDD5 238 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 OR6C68A6NDL8 312 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 GAGE10A6NGK3 116 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 SDHDO14521 159 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 TSPAN4O14817 238 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 LSM1O15116 133 aaKnown RBP7.13□□□□□ -1.27
YBX3-204ENST00000366290 CRCPO75575 148 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 RSL1D1O76021 490 aaKnown RBP7.13□□□□□ -1.27
YBX3-204ENST00000366290 GBAP04062 536 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 CELA2AP08217 269 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 LINC00032P0C843 101 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 MDH1P40925 334 aaKnown RBP7.13□□□□□ -1.27
YBX3-204ENST00000366290 TNFSF10P50591 281 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 HNRNPFP52597 415 aaKnown RBP7.13□□□□□ -1.27
YBX3-204ENST00000366290 LIM2P55344 173 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 HNRNPH2P55795 449 aaKnown RBP7.13□□□□□ -1.27
YBX3-204ENST00000366290 HSD17B7P56937 341 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 TGM3Q08188 693 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 INAQ16352 499 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 PRICKLE4Q2TBC4 344 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 SFT2D3Q587I9 215 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 FAM69AQ5T7M9 428 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 FAM47EQ6ZV65 393 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 FAM57BQ71RH2 274 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 H1FNTQ75WM6 255 aaPredicted RBP7.13□□□□□ -1.27
YBX3-204ENST00000366290 COMMD6Q7Z4G1 85 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 ZNF595Q8IYB9 648 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 ARFGAP2Q8N6H7 521 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 C1orf52Q8N6N3 182 aaKnown RBP7.13□□□□□ -1.27
YBX3-204ENST00000366290 FAM76AQ8TAV0 307 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 ELP5Q8TE02 316 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 DYDC1Q8WWB3 177 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 IGFBPL1Q8WX77 278 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 HDAC2Q92769 488 aaKnown RBP7.13□□□□□ -1.27
YBX3-204ENST00000366290 TSLPQ969D9 159 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 UCN3Q969E3 161 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 SNRNP40Q96DI7 357 aaKnown RBP7.13□□□□□ -1.27
YBX3-204ENST00000366290 C19orf60Q96EN9 201 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 CSF3RQ99062 836 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 LPAR4Q99677 370 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 MAPKAP1Q9BPZ7 522 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 IFT27Q9BW83 186 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 ROGDIQ9GZN7 287 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 LYRM4Q9HD34 91 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 MARCOQ9UEW3 520 aaPredicted RBP7.13□□□□□ -1.27
YBX3-204ENST00000366290 TEKT2Q9UIF3 430 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 ASB4Q9Y574 426 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 PCNX1Q96RV3 2341 aa7.13□□□□□ -1.27
YBX3-204ENST00000366290 TRAV17A0A0B4J275 112 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 ATP6AP2A0A1C7CYW4 349 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 DYTNA2CJ06 578 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 SAGE2PA6NJ88 616 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 TCP11X1B4DZS4 312 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 TEX22C9J3V5 150 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 PSMD12O00232 456 aaPredicted RBP7.12□□□□□ -1.27
YBX3-204ENST00000366290 SLC28A1O00337 649 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 HDAC3O15379 428 aa7.12□□□□□ -1.27
YBX3-204ENST00000366290 EDF1O60869 148 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms