RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 SEC61A2Q9H9S3 476 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 SEMA4GQ9NTN9 838 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 SCP2D1Q9UJQ7 156 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 ZNF705EA8MWA4 302 aaPredicted RBP12.99□□□□□ -0.33
COL6A1-201ENST00000361866 HYAL3O43820 417 aaPredicted RBP12.99□□□□□ -0.33
COL6A1-201ENST00000361866 FCMRO60667 390 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 WISP3O95389 354 aaPredicted RBP12.99□□□□□ -0.33
COL6A1-201ENST00000361866 PRH1P02810 166 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 MAPK3P27361 379 aaPredicted RBP12.99□□□□□ -0.33
COL6A1-201ENST00000361866 S100A10P60903 97 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 COL28A1Q2UY09 1125 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 LRRC56Q8IYG6 542 aaPredicted RBP12.99□□□□□ -0.33
COL6A1-201ENST00000361866 SYNPRQ8TBG9 265 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 MED30Q96HR3 178 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 MAP6Q96JE9 813 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 OR2M2Q96R28 347 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 DDOQ99489 341 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 MNTQ99583 582 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 SEC22CQ9BRL7 303 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 STARD5Q9NSY2 213 aa12.99□□□□□ -0.33
COL6A1-201ENST00000361866 ACSS1Q9NUB1 689 aaPredicted RBP12.99□□□□□ -0.33
COL6A1-201ENST00000361866 SIDT1Q9NXL6 827 aaKnown RBP12.99□□□□□ -0.33
COL6A1-201ENST00000361866 SSC5DA1L4H1 1573 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 SBF2Q86WG5 1849 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 ANKRD61A6NGH8 418 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 SIX6O95475 246 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 APEHP13798 732 aaKnown RBP12.98□□□□□ -0.33
COL6A1-201ENST00000361866 ACTA2P62736 377 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 ACTG2P63267 376 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 MRPL2Q5T653 305 aaKnown RBP12.98□□□□□ -0.33
COL6A1-201ENST00000361866 FAM111BQ6SJ93 734 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 METAP1DQ6UB28 335 aaPredicted RBP12.98□□□□□ -0.33
COL6A1-201ENST00000361866 GCDHQ92947 438 aaPredicted RBP12.98□□□□□ -0.33
COL6A1-201ENST00000361866 SAMD11Q96NU1 681 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 OR14A2Q96R54 314 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 PLA2G12AQ9BZM1 189 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 PELI2Q9HAT8 420 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 PLCL2Q9UPR0 1127 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 DCDC2BA2VCK2 349 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 CDHR4A6H8M9 788 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 SOX1O00570 391 aaPredicted RBP12.98□□□□□ -0.33
COL6A1-201ENST00000361866 AMY2AP04746 511 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 HCCSP53701 268 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 MRPL58Q14197 206 aaKnown RBP12.98□□□□□ -0.33
COL6A1-201ENST00000361866 OCLNQ16625 522 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 TCEAL5Q5H9L2 206 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 TCTE1Q5JU00 501 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 ZCCHC12Q6PEW1 402 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 ARSKQ6UWY0 536 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 OR2L3Q8NG85 312 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 OR52E1Q8NGJ3 308 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 OR13C5Q8NGS8 318 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 ZNF350Q9GZX5 532 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 INSL6Q9Y581 213 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 SLC5A10A0PJK1 596 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 A8MVJ9 347 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 SCDO00767 359 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 CLEC3AO75596 197 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 CTXN1P60606 82 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 GPR50Q13585 617 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 OPCMLQ14982 345 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 OR1Q1Q15612 314 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 ITPRIPL2Q3MIP1 535 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 LAIR2Q6ISS4 152 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 RPL13AP3Q6NVV1 102 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 C15orf40Q8WUR7 153 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 ORAI1Q96D31 301 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 TMEM41AQ96HV5 264 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 ST6GAL2Q96JF0 529 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 MS4A4EQ96PG1 132 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 TNFRSF13CQ96RJ3 184 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 IL21RQ9HBE5 538 aa12.98□□□□□ -0.33
COL6A1-201ENST00000361866 TRBV5-3A0A0A0MS03 114 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 H3BQ06 376 aaPredicted RBP12.97□□□□□ -0.33
COL6A1-201ENST00000361866 HCRTR2O43614 444 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 PRAMEF4O60810 478 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 PVRP15151 417 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 FUT1P19526 365 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 NDUFS1P28331 727 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 CD6P30203 668 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 ETV6P41212 452 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 TM4SF4P48230 202 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 EVX1P49640 407 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 P2RX3P56373 397 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 FGL2Q14314 439 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 PRAMEF9Q5VWM5 478 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 OR56B4Q8NH76 319 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 TMEM43Q9BTV4 400 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.97□□□□□ -0.33
COL6A1-201ENST00000361866 FBXL2Q9UKC9 423 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 A0A1W2PPL8 197 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 KIAA0355O15063 1070 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 NDUFB2O95178 105 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 RLN2P04090 185 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 PIPP12273 146 aaPredicted RBP12.97□□□□□ -0.33
COL6A1-201ENST00000361866 RBM34P42696 430 aaKnown RBP12.97□□□□□ -0.33
COL6A1-201ENST00000361866 PDX1P52945 283 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 DGCR2P98153 550 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 CDNFQ49AH0 187 aa12.97□□□□□ -0.33
COL6A1-201ENST00000361866 ZNF362Q5T0B9 420 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms