RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 POLR1CO15160 346 aaPredicted RBP20.89■□□□□ 0.93
LDB1-201ENST00000361198 NSA2O95478 260 aaKnown RBP20.89■□□□□ 0.93
LDB1-201ENST00000361198 IGKV1D-16P01601 117 aa20.89■□□□□ 0.93
LDB1-201ENST00000361198 MAKP20794 623 aa20.89■□□□□ 0.93
LDB1-201ENST00000361198 FAM53BQ14153 422 aa20.89■□□□□ 0.93
LDB1-201ENST00000361198 AADACL4Q5VUY2 407 aa20.89■□□□□ 0.93
LDB1-201ENST00000361198 OR2T33Q8NG76 320 aa20.89■□□□□ 0.93
LDB1-201ENST00000361198 CNOT9Q92600 299 aaKnown RBP20.89■□□□□ 0.93
LDB1-201ENST00000361198 TM9SF2Q99805 663 aa20.89■□□□□ 0.93
LDB1-201ENST00000361198 CHRDQ9H2X0 955 aa20.89■□□□□ 0.93
LDB1-201ENST00000361198 MRPS33Q9Y291 106 aaKnown RBP20.89■□□□□ 0.93
LDB1-201ENST00000361198 TMEM184BQ9Y519 407 aaPredicted RBP20.89■□□□□ 0.93
LDB1-201ENST00000361198 FMO6PO60774 539 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 SDC3O75056 442 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 ZGLP1P0C6A0 271 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 CDH11P55287 796 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 FXYD6P3P58550 94 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 SKP1P63208 163 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 FABP5Q01469 135 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 RPL6Q02878 288 aaKnown RBP20.88■□□□□ 0.93
LDB1-201ENST00000361198 C17orf82Q86X59 251 aaPredicted RBP20.88■□□□□ 0.93
LDB1-201ENST00000361198 ZNF595Q8IYB9 648 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 SYT14Q8NB59 555 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 ZNF285Q96NJ3 590 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 PRTFDC1Q9NRG1 225 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 SIDT1Q9NXL6 827 aaKnown RBP20.88■□□□□ 0.93
LDB1-201ENST00000361198 CSNK1G3Q9Y6M4 447 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 TRDV1A0A1B0GX56 115 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 HMX3A6NHT5 357 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 DRD5P21918 477 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 MLLT3P42568 568 aaPredicted RBP20.88■□□□□ 0.93
LDB1-201ENST00000361198 GCGRP47871 477 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 RNF113BQ8IZP6 322 aaKnown RBP20.88■□□□□ 0.93
LDB1-201ENST00000361198 RDH10Q8IZV5 341 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 CADM4Q8NFZ8 388 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 MMABQ96EY8 250 aaPredicted RBP20.88■□□□□ 0.93
LDB1-201ENST00000361198 VSTM2LQ96N03 204 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 TEX12Q9BXU0 123 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 OR52D1Q9H346 318 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 UBQLN3Q9H347 655 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 RERGLQ9H628 205 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 SOHLH2Q9NX45 425 aa20.88■□□□□ 0.93
LDB1-201ENST00000361198 FAM47E-STBD1D6RA91 191 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 IDH3BO43837 385 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 TMCC2O75069 709 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 ADAM11O75078 769 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 IFI30P13284 250 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 MAOAP21397 527 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 IGLV3-21P80748 117 aaPredicted RBP20.87■□□□□ 0.93
LDB1-201ENST00000361198 ZNF267Q14586 743 aaPredicted RBP20.87■□□□□ 0.93
LDB1-201ENST00000361198 ZNHIT3Q15649 155 aaPredicted RBP20.87■□□□□ 0.93
LDB1-201ENST00000361198 TAB1Q15750 504 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 TMEM44Q2T9K0 475 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 SLC35F1Q5T1Q4 408 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 BBS1Q8NFJ9 593 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 RFKQ969G6 155 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 COQ7Q99807 217 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 PLCL2Q9UPR0 1127 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 UNC119BA6NIH7 251 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 SEC16AO15027 2179 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 LRRTM2O43300 516 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 ATXN8OSP0DMR3 200 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 SLC1A3P43003 542 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 NKAIN2Q5VXU1 208 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 SPACA7Q96KW9 195 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 HSPA12BQ96MM6 686 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 SOSTQ9BQB4 213 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 ZNF649Q9BS31 505 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 ENKD1Q9H0I2 346 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 PRO3102Q9H379 93 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 MED17Q9NVC6 651 aa20.87■□□□□ 0.93
LDB1-201ENST00000361198 MRPS17Q9Y2R5 130 aaKnown RBP20.87■□□□□ 0.93
LDB1-201ENST00000361198 FAM172BPA6NC97 362 aa20.86■□□□□ 0.93
LDB1-201ENST00000361198 CLDN4O14493 209 aa20.86■□□□□ 0.93
LDB1-201ENST00000361198 FNTBP49356 437 aa20.86■□□□□ 0.93
LDB1-201ENST00000361198 ACSM1Q08AH1 577 aa20.86■□□□□ 0.93
LDB1-201ENST00000361198 NPSR1Q6W5P4 371 aa20.86■□□□□ 0.93
LDB1-201ENST00000361198 ARIH2OSQ8N7S6 290 aa20.86■□□□□ 0.93
LDB1-201ENST00000361198 OR6C4Q8NGE1 309 aa20.86■□□□□ 0.93
LDB1-201ENST00000361198 GRHL3Q8TE85 626 aa20.86■□□□□ 0.93
LDB1-201ENST00000361198 DGAT2Q96PD7 388 aa20.86■□□□□ 0.93
LDB1-201ENST00000361198 CD180Q99467 661 aa20.86■□□□□ 0.93
LDB1-201ENST00000361198 C11orf54Q9H0W9 315 aaPredicted RBP20.86■□□□□ 0.93
LDB1-201ENST00000361198 UCKL1Q9NWZ5 548 aa20.86■□□□□ 0.93
LDB1-201ENST00000361198 SOX30O94993 753 aa20.85■□□□□ 0.93
LDB1-201ENST00000361198 CD79BP40259 229 aa20.85■□□□□ 0.93
LDB1-201ENST00000361198 RCBTB1Q8NDN9 531 aa20.85■□□□□ 0.93
LDB1-201ENST00000361198 OR4F15Q8NGB8 312 aa20.85■□□□□ 0.93
LDB1-201ENST00000361198 FANK1Q8TC84 345 aa20.85■□□□□ 0.93
LDB1-201ENST00000361198 BRIX1Q8TDN6 353 aaKnown RBP20.85■□□□□ 0.93
LDB1-201ENST00000361198 PTCHD1Q96NR3 888 aa20.85■□□□□ 0.93
LDB1-201ENST00000361198 SPRTNQ9H040 489 aaPredicted RBP20.85■□□□□ 0.93
LDB1-201ENST00000361198 HINT3Q9NQE9 182 aaKnown RBP20.85■□□□□ 0.93
LDB1-201ENST00000361198 TOR4AQ9NXH8 423 aa20.85■□□□□ 0.93
LDB1-201ENST00000361198 EXOGQ9Y2C4 368 aaKnown RBP20.85■□□□□ 0.93
LDB1-201ENST00000361198 ASXL3Q9C0F0 2248 aa20.85■□□□□ 0.93
LDB1-201ENST00000361198 LMO7DNF2Z398 122 aa20.85■□□□□ 0.93
LDB1-201ENST00000361198 LALBAP00709 142 aa20.85■□□□□ 0.93
LDB1-201ENST00000361198 TCEA1P23193 301 aaKnown RBP20.85■□□□□ 0.93
LDB1-201ENST00000361198 GPR3P46089 330 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms