RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 EEFSECP57772 596 aaKnown RBP17.34■□□□□ 0.37
HLA-DRB1-201ENST00000360004 NCALDP61601 193 aa17.34■□□□□ 0.37
HLA-DRB1-201ENST00000360004 LIPEQ05469 1076 aa17.34■□□□□ 0.37
HLA-DRB1-201ENST00000360004 PPP4R4Q6NUP7 873 aa17.34■□□□□ 0.37
HLA-DRB1-201ENST00000360004 POMZP3Q6PJE2 187 aa17.34■□□□□ 0.37
HLA-DRB1-201ENST00000360004 GTPBP8Q8N3Z3 284 aaPredicted RBP17.34■□□□□ 0.37
HLA-DRB1-201ENST00000360004 ATP6V1C2Q8NEY4 427 aa17.34■□□□□ 0.37
HLA-DRB1-201ENST00000360004 ST8SIA1Q92185 356 aa17.34■□□□□ 0.37
HLA-DRB1-201ENST00000360004 ARSGQ96EG1 525 aa17.34■□□□□ 0.37
HLA-DRB1-201ENST00000360004 KCTD14Q9BQ13 255 aaPredicted RBP17.34■□□□□ 0.37
HLA-DRB1-201ENST00000360004 GPATCH1Q9BRR8 931 aaKnown RBP17.34■□□□□ 0.37
HLA-DRB1-201ENST00000360004 SPAG4Q9NPE6 437 aa17.34■□□□□ 0.37
HLA-DRB1-201ENST00000360004 SERINC1Q9NRX5 453 aa17.34■□□□□ 0.37
HLA-DRB1-201ENST00000360004 RLIMQ9NVW2 624 aa17.34■□□□□ 0.37
HLA-DRB1-201ENST00000360004 CMTM6Q9NX76 183 aa17.34■□□□□ 0.37
HLA-DRB1-201ENST00000360004 ZNF337Q9Y3M9 751 aa17.34■□□□□ 0.37
HLA-DRB1-201ENST00000360004 ESPL1Q14674 2120 aa17.33■□□□□ 0.37
HLA-DRB1-201ENST00000360004 ELOVL7A1L3X0 281 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 M0QX08 132 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 OPN1SWP03999 348 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 HOXD4P09016 255 aaPredicted RBP17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 GKN3PP0CG01 181 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 PTGER4P35408 488 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 IDH2P48735 452 aaKnown RBP17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 EEF1A1P68104 462 aaKnown RBP17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 MERTKQ12866 999 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 TOMM34Q15785 309 aaPredicted RBP17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 DCST1Q5T197 706 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 C1orf185Q5T7R7 199 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 TMEM211Q6ICI0 200 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 TRPM8Q7Z2W7 1104 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 CALHM3Q86XJ0 350 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 SLC15A3Q8IY34 581 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 ULK2Q8IYT8 1036 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 MICU2Q8IYU8 434 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 CADM2Q8N3J6 435 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 FAM71CQ8NEG0 241 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 TNIP2Q8NFZ5 429 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 MRGPRX4Q96LA9 322 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 ZNF583Q96ND8 569 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 PINK1Q9BXM7 581 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 ALG2Q9H553 416 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 TMEM185BQ9H7F4 350 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 RPS6KB2Q9UBS0 482 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 AP4B1Q9Y6B7 739 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 ZGRF1Q86YA3 2104 aa17.33■□□□□ 0.36
HLA-DRB1-201ENST00000360004 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 C7orf72A4D263 438 aa17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 AHRRA9YTQ3 701 aa17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 BCAS1O75363 584 aaPredicted RBP17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 PRKCAP17252 672 aa17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 CALB2P22676 271 aa17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 B3GALT5-AS1P59052 145 aa17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 RPS3AP61247 264 aaKnown RBP17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 SGCBQ16585 318 aa17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 LRRC23Q53EV4 343 aaPredicted RBP17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 PDSS1Q5T2R2 415 aa17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 DHRS4L2Q6PKH6 230 aa17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 B3GNT6Q6ZMB0 384 aa17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 CLIP4Q8N3C7 705 aa17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 FAM26EQ8N5C1 309 aa17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 SMYD1Q8NB12 490 aa17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 OR10Q1Q8NGQ4 319 aa17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 RASSF5Q8WWW0 418 aa17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 RELTQ969Z4 430 aa17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 WDYHV1Q96HA8 205 aa17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 TRIB1Q96RU8 372 aa17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 KLHDC3Q9BQ90 382 aa17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 PRDM14Q9GZV8 571 aa17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 MEMO1Q9Y316 297 aa17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 SPIN1Q9Y657 262 aaPredicted RBP17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 ZNF407Q9C0G0 2248 aa17.32■□□□□ 0.36
HLA-DRB1-201ENST00000360004 GJE1A6NN92 205 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 B2RBV5 119 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 E9PLN8 166 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 NME4O00746 187 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 EIF1AYO14602 144 aaKnown RBP17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 AP3D1O14617 1153 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 DNAJA2O60884 412 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 OPN1LWP04000 364 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 CPN1P15169 458 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 ELK4P28324 431 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 ADH6P28332 368 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 SFTPDP35247 375 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 LHX2P50458 406 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 GZMMP51124 257 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 RGS8P57771 180 aaPredicted RBP17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 SESN3P58005 492 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 SLC25A3Q00325 362 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 EPS8Q12929 822 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 VEZF1Q14119 521 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 BCL2A1Q16548 175 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 P4HA3Q7Z4N8 544 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 GRAMD2AQ8IUY3 354 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 PGAM4Q8N0Y7 254 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 FIG4Q92562 907 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 VKORC1Q9BQB6 163 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 ACER3Q9NUN7 267 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 USP22Q9UPT9 525 aa17.31■□□□□ 0.36
HLA-DRB1-201ENST00000360004 FRS3O43559 492 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms