RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 MED31Q9Y3C7 131 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 PTRH2Q9Y3E5 179 aaKnown RBP12.39□□□□□ -0.43
CCDC197-201ENST00000359253 PCDHGB6Q9Y5F9 930 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 PCDHGB1Q9Y5G3 927 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 SNX5Q9Y5X3 404 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 NPFFR2Q9Y5X5 522 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 B3GALT1Q9Y5Z6 326 aa12.39□□□□□ -0.43
CCDC197-201ENST00000359253 COL27A1Q8IZC6 1860 aaPredicted RBP12.39□□□□□ -0.43
CCDC197-201ENST00000359253 FER1L5A0AVI2 2057 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 NINQ8N4C6 2090 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 SEC16AO15027 2179 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 A0A1B0GWA3 101 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 EIF4E1BA6NMX2 242 aaKnown RBP12.38□□□□□ -0.43
CCDC197-201ENST00000359253 KLF4O43474 513 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 KLF7O75840 302 aaPredicted RBP12.38□□□□□ -0.43
CCDC197-201ENST00000359253 LYPD3O95274 346 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 LINGO3P0C6S8 592 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 ICAM2P13598 275 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 ATP6V1B1P15313 513 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 JUNBP17275 347 aaPredicted RBP12.38□□□□□ -0.43
CCDC197-201ENST00000359253 FUT4P22083 530 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 EPHA2P29317 976 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 ALDH3B2P48448 385 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 GIPRP48546 466 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 CLDN6P56747 220 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 HOXC5Q00444 222 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 CDK5Q00535 292 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 PLAURQ03405 335 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 ALG10BQ5I7T1 473 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 MEDAGQ5VYS4 303 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 C12orf73Q69YU5 71 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 BORAQ6PGQ7 559 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 LINC00114Q6XXX2 140 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 PTCHD4Q6ZW05 846 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 NRMQ8IXM6 262 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 DND1Q8IYX4 353 aaKnown RBP12.38□□□□□ -0.43
CCDC197-201ENST00000359253 ESX1Q8N693 406 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 KDF1Q8NAX2 398 aaPredicted RBP12.38□□□□□ -0.43
CCDC197-201ENST00000359253 GALNT6Q8NCL4 622 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 OR8J1Q8NGP2 316 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 TEX47Q8TBZ9 253 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 SLC22A8Q8TCC7 542 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 PHOSPHO1Q8TCT1 267 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 ELP5Q8TE02 316 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 PRR14Q9BWN1 585 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 TBL1XR1Q9BZK7 514 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 SPRY4Q9C004 299 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 DUSP21Q9H596 190 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 CCDC86Q9H6F5 360 aaKnown RBP12.38□□□□□ -0.43
CCDC197-201ENST00000359253 CLN6Q9NWW5 311 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 IL20Q9NYY1 176 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 RNF6Q9Y252 685 aa12.38□□□□□ -0.43
CCDC197-201ENST00000359253 TRBV11-1A0A0K0K1C0 115 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 SNTNA6NMZ2 147 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 NDUFB5O43674 189 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 RCBTB2O95199 551 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 TP53P04637 393 aaPredicted RBP12.37□□□□□ -0.43
CCDC197-201ENST00000359253 GABRB1P18505 474 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 ITIH1P19827 911 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 CD82P27701 267 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 POU1F1P28069 291 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 IDH2P48735 452 aaKnown RBP12.37□□□□□ -0.43
CCDC197-201ENST00000359253 GABREP78334 506 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 SKP2Q13309 424 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 SSPNQ14714 243 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 PCOLCEQ15113 449 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 TMEM44Q2T9K0 475 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 PLAG1Q6DJT9 500 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 SLC27A4Q6P1M0 643 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 NDUFAF7Q7L592 441 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 MRGPREQ86SM8 312 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 CCDC71Q8IV32 467 aaPredicted RBP12.37□□□□□ -0.43
CCDC197-201ENST00000359253 SVOPQ8N4V2 548 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 BPIFB6Q8NFQ5 453 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 TMEM255BQ8WV15 326 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 SLC38A2Q96QD8 506 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 NODALQ96S42 347 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 GPR87Q9BY21 358 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 POLDIP3Q9BY77 421 aaKnown RBP12.37□□□□□ -0.43
CCDC197-201ENST00000359253 DEFB126Q9BYW3 111 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 MMP25Q9NPA2 562 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 MED17Q9NVC6 651 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 FLRT3Q9NZU0 649 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 PISDQ9UG56 409 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 ZNF223Q9UK11 482 aaPredicted RBP12.37□□□□□ -0.43
CCDC197-201ENST00000359253 NCOR2Q9Y618 2525 aa12.37□□□□□ -0.43
CCDC197-201ENST00000359253 A0A087WUJ7 227 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 IGHV1-45A0A0A0MS14 117 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 IGHV3-20A0A0C4DH32 117 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 CDRT15L2A8MXV6 281 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 C21orf140B9A014 251 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 M0R3G1 203 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 AGRPO00253 132 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 FADS1O60427 444 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 ICOSLGO75144 302 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 BCAS1O75363 584 aaPredicted RBP12.36□□□□□ -0.43
CCDC197-201ENST00000359253 WBP4O75554 376 aaKnown RBP12.36□□□□□ -0.43
CCDC197-201ENST00000359253 TNFSF15O95150 251 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 HMGN1P05114 100 aa12.36□□□□□ -0.43
CCDC197-201ENST00000359253 UMODP07911 640 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms