RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 HMGA1P17096 107 aaKnown RBP12.83□□□□□ -0.35
VCP-201ENST00000358901 P2RY14Q15391 338 aa12.83□□□□□ -0.35
VCP-201ENST00000358901 C3orf38Q5JPI3 329 aa12.83□□□□□ -0.35
VCP-201ENST00000358901 CADM3Q8N126 398 aa12.83□□□□□ -0.35
VCP-201ENST00000358901 GTPBP8Q8N3Z3 284 aaPredicted RBP12.83□□□□□ -0.35
VCP-201ENST00000358901 LILRB4Q8NHJ6 448 aa12.83□□□□□ -0.35
VCP-201ENST00000358901 ADAMTS18Q8TE60 1221 aa12.83□□□□□ -0.35
VCP-201ENST00000358901 NEURL3Q96EH8 262 aa12.83□□□□□ -0.35
VCP-201ENST00000358901 GON7Q9BXV9 100 aa12.83□□□□□ -0.35
VCP-201ENST00000358901 RBFOX1Q9NWB1 397 aaKnown RBP12.83□□□□□ -0.35
VCP-201ENST00000358901 SCN9AQ15858 1988 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 NPC1O15118 1278 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 NUPL2O15504 423 aaKnown RBP12.83□□□□□ -0.36
VCP-201ENST00000358901 SYT7O43581 403 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 CR2P20023 1033 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 KCNJ5P48544 419 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 ZNF84P51523 738 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 GP2P55259 537 aaKnown RBP12.83□□□□□ -0.36
VCP-201ENST00000358901 ZNF616Q08AN1 781 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 WDR45BQ5MNZ6 344 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 FAM69BQ5VUD6 431 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 C18orf63Q68DL7 685 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 FAM111BQ6SJ93 734 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 KCTD20Q7Z5Y7 419 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 TMEM150AQ86TG1 271 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 BRIX1Q8TDN6 353 aaKnown RBP12.83□□□□□ -0.36
VCP-201ENST00000358901 CHTF18Q8WVB6 975 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 DIO2Q92813 273 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 SHDQ96IW2 340 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 ZNF582Q96NG8 517 aaPredicted RBP12.83□□□□□ -0.36
VCP-201ENST00000358901 SAMD11Q96NU1 681 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 GLIPR2Q9H4G4 154 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 DNMT3BQ9UBC3 853 aaKnown RBP12.83□□□□□ -0.36
VCP-201ENST00000358901 HIF3AQ9Y2N7 669 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 AHDC1Q5TGY3 1603 aaPredicted RBP12.83□□□□□ -0.36
VCP-201ENST00000358901 ITGB4P16144 1822 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 HIDE1A8MVS5 230 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 PEX12O00623 359 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 CACNG3O60359 315 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 MPIG6BO95866 241 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 SNRPBP14678 240 aaKnown RBP12.83□□□□□ -0.36
VCP-201ENST00000358901 MMP12P39900 470 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 XCR1P46094 333 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 TLE3Q04726 772 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 RAET1LQ5VY80 246 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 ZIC5Q96T25 663 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 ADAM29Q9UKF5 820 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 MAOBP27338 520 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 RPS5P46782 204 aaKnown RBP12.83□□□□□ -0.36
VCP-201ENST00000358901 C11orf91Q3C1V1 193 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 AWAT2Q6E213 333 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 FCRLAQ7L513 359 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 HOXB13Q92826 284 aaPredicted RBP12.83□□□□□ -0.36
VCP-201ENST00000358901 ARRDC3Q96B67 414 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 DUS3LQ96G46 650 aaKnown RBP12.83□□□□□ -0.36
VCP-201ENST00000358901 TMEM38AQ9H6F2 299 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 RNF167Q9H6Y7 350 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 ASIC5Q9NY37 505 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 UGT2A1Q9Y4X1 527 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 LRP5O75197 1615 aa12.83□□□□□ -0.36
VCP-201ENST00000358901 DDX60LQ5H9U9 1706 aaKnown RBP12.83□□□□□ -0.36
VCP-201ENST00000358901 FAM186AA6NE01 2351 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 F5H5P2 479 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 DCNP07585 359 aaKnown RBP12.82□□□□□ -0.36
VCP-201ENST00000358901 LIPCP11150 499 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 SLC2A5P22732 501 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 SHC1P29353 583 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 RABIFP47224 123 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 HNRNPKP61978 463 aaKnown RBP eCLIP12.82□□□□□ -0.36
VCP-201ENST00000358901 EFR3AQ14156 821 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 GNMTQ14749 295 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 LTB4RQ15722 352 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 PDSS1Q5T2R2 415 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 RBM45Q8IUH3 476 aaKnown RBP12.82□□□□□ -0.36
VCP-201ENST00000358901 CLDN22Q8N7P3 220 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 ZNF419Q96HQ0 510 aaPredicted RBP12.82□□□□□ -0.36
VCP-201ENST00000358901 FOXN4Q96NZ1 517 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 INTS14Q96SY0 518 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 SIDT1Q9NXL6 827 aaKnown RBP12.82□□□□□ -0.36
VCP-201ENST00000358901 A0A0J9YY10 115 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 SLC9B1P1A6NJY1 282 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 ACOD1A6NK06 481 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 ZNF736B4DX44 427 aaPredicted RBP12.82□□□□□ -0.36
VCP-201ENST00000358901 DLX5P56178 289 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 CDK10Q15131 360 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 OR9A4Q8NGU2 314 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 SLC7A13Q8TCU3 470 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 TM4SF18Q96CE8 201 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 FAM71F1Q96KD3 344 aaPredicted RBP12.82□□□□□ -0.36
VCP-201ENST00000358901 TIMM29Q9BSF4 260 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 DUSP21Q9H596 190 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 ABRACLQ9P1F3 81 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 OSGIN1Q9UJX0 560 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 SLC7A11Q9UPY5 501 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 VDAC3Q9Y277 283 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 NINQ8N4C6 2090 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 FZD7O75084 574 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 IL33O95760 270 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 CRYZL1O95825 349 aa12.82□□□□□ -0.36
VCP-201ENST00000358901 UGT2B7P16662 529 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms