RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 TP53P04637 393 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-203ENST00000358528 ANXA2P07355 339 aaKnown RBP6.12□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF888P0CJ79 500 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-203ENST00000358528 EPCAMP16422 314 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 ATP5A1P25705 553 aaKnown RBP6.12□□□□□ -1.43
CSDE1-203ENST00000358528 PGDP52209 483 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 ARHGDIBP52566 201 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 AGFG1P52594 562 aaKnown RBP6.12□□□□□ -1.43
CSDE1-203ENST00000358528 PRDX1Q06830 199 aaKnown RBP6.12□□□□□ -1.43
CSDE1-203ENST00000358528 MESP2Q0VG99 397 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 GPNMBQ14956 572 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 PON3Q15166 354 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 GRK1Q15835 563 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 C2orf27AQ580R0 203 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 TEX261Q6UWH6 196 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 APOOLQ6UXV4 268 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF782Q6ZMW2 699 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF620Q6ZNG0 422 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 FCRLAQ7L513 359 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 FAM220AQ7Z4H9 259 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 NRROSQ86YC3 692 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 SFTPA1Q8IWL2 248 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 C17orf47Q8NEP4 570 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 OR4K14Q8NGD5 310 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 OR4D9Q8NGE8 314 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.12□□□□□ -1.433e-6■■□□□ 12
CSDE1-203ENST00000358528 SRMSQ9H3Y6 488 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 PELI2Q9HAT8 420 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 GPN1Q9HCN4 374 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-203ENST00000358528 MAN2C1Q9NTJ4 1040 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 SAGE1Q9NXZ1 904 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 B3GNT2Q9NY97 397 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 MYEF2Q9P2K5 600 aaKnown RBP6.12□□□□□ -1.43
CSDE1-203ENST00000358528 KCNN3Q9UGI6 736 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 LIPT1Q9Y234 373 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 POLHQ9Y253 713 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF443Q9Y2A4 671 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-203ENST00000358528 U3KQ87 197 aa6.12□□□□□ -1.43
CSDE1-203ENST00000358528 DSPPQ9NZW4 1301 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 EDDM13A0A1B0GTR0 161 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 TRAPPC13A5PLN9 417 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 TRABD2BA6NFA1 517 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 PRRT4C9JH25 899 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 PEX12O00623 359 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 IFNA16P05015 189 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 POLR2CP19387 275 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 TBXA2RP21731 343 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 CFL1P23528 166 aaKnown RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 ACTR1BP42025 376 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 STARP49675 285 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 EPHA5P54756 1037 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 PER3P56645 1201 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 ACTR1AP61163 376 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 CDK3Q00526 305 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 DUSP2Q05923 314 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 ELAVL3Q14576 367 aaKnown RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF234Q14588 700 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 EIPR1Q53HC9 387 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 MRPL2Q5T653 305 aaKnown RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 OTPQ5XKR4 325 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 C19orf48Q6RUI8 117 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 TMEM91Q6ZNR0 172 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 C12orf40Q86WS4 652 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 TMPRSS12Q86WS5 348 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 LRRC25Q8N386 305 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 SPERTQ8NA61 448 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 MORN4Q8NDC4 146 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 TTLQ8NG68 377 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 OR11H7Q8NGC8 314 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 OR52E1Q8NGJ3 308 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 OR5J2Q8NH18 312 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 ELP4Q96EB1 424 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 SLC35A4Q96G79 324 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 TNFRSF13CQ96RJ3 184 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 DHRS9Q9BPW9 319 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 MED18Q9BUE0 208 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 C1QTNF2Q9BXJ5 285 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 RSPH9Q9H1X1 276 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 SLC38A1Q9H2H9 487 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 IGFLR1Q9H665 355 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 CCDC86Q9H6F5 360 aaKnown RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 SRA1Q9HD15 236 aaKnown RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 PRDM9Q9NQV7 894 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 CBLCQ9ULV8 474 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 ICKQ9UPZ9 632 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 OR6C74A6NCV1 312 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 B8ZZF3 427 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 B3GALT2O43825 422 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 SPDEFO95238 335 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 SERPINA3P01011 423 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 RBMS1P29558 406 aaKnown RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 FGF9P31371 208 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-203ENST00000358528 MTNR1BP49286 362 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 FOXK2Q01167 660 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 OR1Q1Q15612 314 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 TCTE1Q5JU00 501 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 TIGD3Q6B0B8 471 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 CNKSR3Q6P9H4 555 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 MBOAT2Q6ZWT7 520 aa6.11□□□□□ -1.43
CSDE1-203ENST00000358528 GPALPP1Q8IXQ4 340 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms