RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 C4orf17Q53FE4 359 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 NUP37Q8NFH4 326 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 UCN3Q969E3 161 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 LUZP4Q9P127 313 aa9.2□□□□□ -0.94
CHD3-202ENST00000358181 UBFD1O14562 309 aaKnown RBP9.19□□□□□ -0.94
CHD3-202ENST00000358181 UCHL1P09936 223 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 BCKDHBP21953 392 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 TAS2R60P59551 318 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 ZNF805Q5CZA5 627 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 ZSWIM9Q86XI8 627 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 BHLHE23Q8NDY6 225 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 OR5M1Q8NGP8 315 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 SMAP2Q8WU79 429 aaPredicted RBP9.19□□□□□ -0.94
CHD3-202ENST00000358181 ZNF296Q8WUU4 475 aaPredicted RBP9.19□□□□□ -0.94
CHD3-202ENST00000358181 MAL2Q969L2 176 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 TOE1Q96GM8 510 aaKnown RBP9.19□□□□□ -0.94
CHD3-202ENST00000358181 FYTTD1Q96QD9 318 aaKnown RBP9.19□□□□□ -0.94
CHD3-202ENST00000358181 SLC19A3Q9BZV2 496 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 CRISPLD2Q9H0B8 497 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 SLC6A17Q9H1V8 727 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 NSUN3Q9H649 340 aaKnown RBP9.19□□□□□ -0.94
CHD3-202ENST00000358181 AKTIPQ9H8T0 292 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 CHRNA9Q9UGM1 479 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 C12orf71A8MTZ7 269 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 SUSD5O60279 629 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 HOXB5P09067 269 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 PSMB10P40306 273 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 ARSDP51689 593 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 PRMT2P55345 433 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 GPR50Q13585 617 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 RPS26P11Q5JNZ5 115 aaPredicted RBP9.19□□□□□ -0.94
CHD3-202ENST00000358181 OSTM1Q86WC4 334 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 MOCOSQ96EN8 888 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 TVP23CQ96ET8 276 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 TIMM29Q9BSF4 260 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 MARCH4Q9P2E8 410 aaPredicted RBP9.19□□□□□ -0.94
CHD3-202ENST00000358181 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.19□□□□□ -0.94
CHD3-202ENST00000358181 IFT172Q9UG01 1749 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 ZCWPW2A0A1B0GU75 182 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 KRBOX1C9JBD0 128 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 FADS1O60427 444 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 LDB3O75112 727 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 MAP2K4P45985 399 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 CLDN17P56750 224 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 C9orf43Q8TAL5 461 aaPredicted RBP9.19□□□□□ -0.94
CHD3-202ENST00000358181 ZNF436Q9C0F3 470 aaPredicted RBP9.19□□□□□ -0.94
CHD3-202ENST00000358181 SPHK2Q9NRA0 654 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 SCML2Q9UQR0 700 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 V9GYS6 101 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 C3P01024 1663 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 OR6C65A6NJZ3 312 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 FAM166BA8MTA8 275 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 KLRC4-KLRK1H3BQV0 150 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 SIGLEC6O43699 453 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 GATCO43716 136 aaKnown RBP9.19□□□□□ -0.94
CHD3-202ENST00000358181 APBB3O95704 486 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 WNT11O96014 354 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 NUDT7P0C024 238 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 HOXB6P17509 224 aaKnown RBP9.19□□□□□ -0.94
CHD3-202ENST00000358181 AGTR2P50052 363 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 NKX3-2P78367 333 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 RFTN1Q14699 578 aaPredicted RBP9.19□□□□□ -0.94
CHD3-202ENST00000358181 OR52N2Q8NGI0 321 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 ZNF764Q96H86 408 aaPredicted RBP9.19□□□□□ -0.94
CHD3-202ENST00000358181 MAELQ96JY0 434 aaKnown RBP9.19□□□□□ -0.94
CHD3-202ENST00000358181 SDCBP2Q9H190 292 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 CHST11Q9NPF2 352 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 UFSP2Q9NUQ7 469 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 PIRO00625 290 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 EMC8O43402 210 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 L1CAMP32004 1257 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 PTGER1P34995 402 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 AMTP48728 403 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 C14orf28Q4W4Y0 310 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 OR2T5Q6IEZ7 315 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 MISPQ8IVT2 679 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 GLB1L2Q8IW92 636 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 ACBD7Q8N6N7 88 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 OR2T29Q8NH02 315 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 HDHD5Q9BXW7 423 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 LIN28AQ9H9Z2 209 aaKnown RBP9.19□□□□□ -0.94
CHD3-202ENST00000358181 SLC7A8Q9UHI5 535 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 C20orf202A1L168 122 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 CXorf49A8MYA2 514 aaPredicted RBP9.19□□□□□ -0.94
CHD3-202ENST00000358181 GCGRP47871 477 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 FBXL22Q6P050 247 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 KRTCAP2Q8N6L1 136 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 OR1E3Q8WZA6 343 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 ANKRD9Q96BM1 317 aaPredicted RBP9.19□□□□□ -0.94
CHD3-202ENST00000358181 SLC30A2Q9BRI3 323 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 GALPQ9UBC7 116 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 MRC1P22897 1456 aa9.19□□□□□ -0.94
CHD3-202ENST00000358181 CYR61O00622 381 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 C8BP07358 591 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 LIPIQ6XZB0 460 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 PLPP6Q8IY26 295 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 TMEM217Q8N7C4 229 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 NPEPL1Q8NDH3 523 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 OR8U1Q8NH10 309 aa9.18□□□□□ -0.94
CHD3-202ENST00000358181 SCAMP4Q969E2 229 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms