RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 SFRP5Q5T4F7 317 aa9.5□□□□□ -0.89
CAPN3-204ENST00000356316 FCRLAQ7L513 359 aa9.5□□□□□ -0.89
CAPN3-204ENST00000356316 C6orf120Q7Z4R8 191 aa9.5□□□□□ -0.89
CAPN3-204ENST00000356316 TUSC5Q8IXB3 177 aa9.5□□□□□ -0.89
CAPN3-204ENST00000356316 VPS37AQ8NEZ2 397 aa9.5□□□□□ -0.89
CAPN3-204ENST00000356316 OR5W2Q8NH69 310 aa9.5□□□□□ -0.89
CAPN3-204ENST00000356316 OR5AK3PQ8NH89 298 aa9.5□□□□□ -0.89
CAPN3-204ENST00000356316 GPR119Q8TDV5 335 aa9.5□□□□□ -0.89
CAPN3-204ENST00000356316 RNF128Q8TEB7 428 aa9.5□□□□□ -0.89
CAPN3-204ENST00000356316 ZFP90Q8TF47 636 aa9.5□□□□□ -0.89
CAPN3-204ENST00000356316 ABHD3Q8WU67 409 aa9.5□□□□□ -0.89
CAPN3-204ENST00000356316 TMEM234Q8WY98 164 aa9.5□□□□□ -0.89
CAPN3-204ENST00000356316 KISS1RQ969F8 398 aaPredicted RBP9.5□□□□□ -0.89
CAPN3-204ENST00000356316 S100PBPQ96BU1 408 aa9.5□□□□□ -0.89
CAPN3-204ENST00000356316 C3orf30Q96M34 536 aa9.5□□□□□ -0.89
CAPN3-204ENST00000356316 SDF2Q99470 211 aa9.5□□□□□ -0.89
CAPN3-204ENST00000356316 GSX2Q9BZM3 304 aa9.5□□□□□ -0.89
CAPN3-204ENST00000356316 L2HGDHQ9H9P8 463 aa9.5□□□□□ -0.89
CAPN3-204ENST00000356316 EXD2Q9NVH0 621 aa9.5□□□□□ -0.89
CAPN3-204ENST00000356316 GPATCH2Q9NW75 528 aa9.5□□□□□ -0.89
CAPN3-204ENST00000356316 NOP53Q9NZM5 478 aaKnown RBP9.5□□□□□ -0.89
CAPN3-204ENST00000356316 KLHL9Q9P2J3 617 aa9.5□□□□□ -0.89
CAPN3-204ENST00000356316 KLHL13Q9P2N7 655 aa9.5□□□□□ -0.89
CAPN3-204ENST00000356316 LGALS13Q9UHV8 139 aa9.5□□□□□ -0.89
CAPN3-204ENST00000356316 SERINC4A6NH21 518 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 HS3ST1O14792 307 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 EFNA2O43921 213 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 CNOT4O95628 575 aaKnown RBP9.49□□□□□ -0.89
CAPN3-204ENST00000356316 AK1P00568 194 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 ADAP00813 363 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 CD3EP07766 207 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 ENPP1P22413 925 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 LOXP28300 417 aaPredicted RBP9.49□□□□□ -0.89
CAPN3-204ENST00000356316 SHC1P29353 583 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 ATP5J2P56134 94 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 RAC3P60763 192 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 HBA1P69905 142 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 PPP2R2BQ00005 443 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 SELENBP1Q13228 472 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 QPRTQ15274 297 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 SMU1Q2TAY7 513 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 NDUFAF6Q330K2 333 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 ATAD3BQ5T9A4 648 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 C16orf62Q7Z3J2 963 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 NUFIP2Q7Z417 695 aaKnown RBP9.49□□□□□ -0.89
CAPN3-204ENST00000356316 RIMKLAQ8IXN7 391 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 CIARTQ8N365 385 aaPredicted RBP9.49□□□□□ -0.89
CAPN3-204ENST00000356316 ZNF611Q8N823 705 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 OR5D16Q8NGK9 328 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 AKAP1Q92667 903 aaKnown RBP eCLIP9.49□□□□□ -0.89
CAPN3-204ENST00000356316 TRMT61AQ96FX7 289 aaKnown RBP9.49□□□□□ -0.89
CAPN3-204ENST00000356316 COX4I2Q96KJ9 171 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 THUMPD3Q9BV44 507 aaKnown RBP9.49□□□□□ -0.89
CAPN3-204ENST00000356316 SRXN1Q9BYN0 137 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 ANKZF1Q9H8Y5 726 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 LAMP3Q9UQV4 416 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 RNF115Q9Y4L5 304 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 KCNE3Q9Y6H6 103 aa9.49□□□□□ -0.89
CAPN3-204ENST00000356316 NUP214P35658 2090 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-204ENST00000356316 A0A1W2PNR3 127 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 WDR91A4D1P6 747 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 TRIM64A6NGJ6 449 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 TRIM64BA6NI03 449 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 CLOCKO15516 846 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 OIP5O43482 229 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 SNUPNO95149 360 aaKnown RBP9.48□□□□□ -0.89
CAPN3-204ENST00000356316 PLAUP00749 431 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 CSTAP01040 98 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 MYZAPP0CAP1 466 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 PGCP20142 388 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 RPS4XP62701 263 aaKnown RBP9.48□□□□□ -0.89
CAPN3-204ENST00000356316 CSNK2A1P68400 391 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-204ENST00000356316 RASGEF1BQ0VAM2 473 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 ITGADQ13349 1161 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 TSC22D1Q15714 1073 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 TOMM34Q15785 309 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-204ENST00000356316 ARHGAP11BQ3KRB8 267 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 TIGD2Q4W5G0 525 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.48□□□□□ -0.89
CAPN3-204ENST00000356316 PDZK1Q5T2W1 519 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 ANXA8L1Q5VT79 327 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 C3orf33Q6P1S2 294 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 EMBQ6PCB8 327 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 TFAP2EQ6VUC0 442 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 EIF3MQ7L2H7 374 aaKnown RBP9.48□□□□□ -0.89
CAPN3-204ENST00000356316 ZNF100Q8IYN0 542 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 KIRREL3Q8IZU9 778 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 GABRG1Q8N1C3 465 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 OR4A15Q8NGL6 344 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 ZNF563Q8TA94 476 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 ST8SIA1Q92185 356 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 GTPBP3Q969Y2 492 aaKnown RBP9.48□□□□□ -0.89
CAPN3-204ENST00000356316 MUCL1Q96DR8 90 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 ARSGQ96EG1 525 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 SLC35G5Q96KT7 338 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 PPP1R36Q96LQ0 422 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 ZIM3Q96PE6 472 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 OR5B2Q96R09 309 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 KLHDC3Q9BQ90 382 aa9.48□□□□□ -0.89
CAPN3-204ENST00000356316 DPY30Q9C005 99 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms