RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 RRASP10301 218 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 ANXA7P20073 488 aaKnown RBP9.41□□□□□ -0.9
PTPRA-203ENST00000356147 CFL1P23528 166 aaKnown RBP9.41□□□□□ -0.9
PTPRA-203ENST00000356147 PTBP1P26599 531 aaKnown RBP eCLIP9.41□□□□□ -0.95e-7■■■■□ 19.7
PTPRA-203ENST00000356147 BCL6P41182 706 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 ARHGDIBP52566 201 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 DEFB103AP81534 67 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 CRMP1Q14194 572 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 CLLU1Q5K131 121 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 PRPF38BQ5VTL8 546 aaKnown RBP9.41□□□□□ -0.9
PTPRA-203ENST00000356147 MEPCEQ7L2J0 689 aaKnown RBP9.41□□□□□ -0.9
PTPRA-203ENST00000356147 LINC00471Q8N535 108 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 SRFBP1Q8NEF9 429 aaKnown RBP9.41□□□□□ -0.9
PTPRA-203ENST00000356147 OR52B4Q8NGK2 314 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 ADAMTS15Q8TE58 950 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 ZMYND19Q96E35 227 aaPredicted RBP9.41□□□□□ -0.9
PTPRA-203ENST00000356147 OR14A2Q96R54 314 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 NDC1Q9BTX1 674 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 ZNF436Q9C0F3 470 aaPredicted RBP9.41□□□□□ -0.9
PTPRA-203ENST00000356147 BCL2L10Q9HD36 194 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 RWDD3Q9Y3V2 267 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 OR1A2Q9Y585 309 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 PLXNA2O75051 1894 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 IDSB3KWA1 339 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 MID1O15344 667 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 UCHL1P09936 223 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 ICAM2P13598 275 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 GRPRP30550 384 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 STAT5AP42229 794 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 MAPK14Q16539 360 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 STPG1Q5TH74 334 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 LHX8Q68G74 356 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 MBOAT2Q6ZWT7 520 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 PRSS42Q7Z5A4 293 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 ZNF614Q8N883 585 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 ADAMTS14Q8WXS8 1223 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 KISS1RQ969F8 398 aaPredicted RBP9.41□□□□□ -0.9
PTPRA-203ENST00000356147 NXPE3Q969Y0 559 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 TEAD3Q99594 435 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 GSX2Q9BZM3 304 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 FN3KQ9H479 309 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 KLHL28Q9NXS3 571 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 MGAT4CQ9UBM8 478 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 PHF11Q9UIL8 331 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 KCNK6Q9Y257 313 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 MAB21L2Q9Y586 359 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 J3QRE1 110 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 SMAD9O15198 467 aaKnown RBP9.4□□□□□ -0.9
PTPRA-203ENST00000356147 CASC3O15234 703 aaKnown RBP9.4□□□□□ -0.9
PTPRA-203ENST00000356147 DNAJB6O75190 326 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 PPP1R3DO95685 299 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 MT-ND5P03915 603 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 CLTBP09497 229 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 BMP7P18075 431 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 CXCL2P19875 107 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 F8A1P23610 371 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 REEP5Q00765 189 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 GNA13Q14344 377 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 OPCMLQ14982 345 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 GXYLT1Q4G148 440 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 KCTD20Q7Z5Y7 419 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 TMEFF1Q8IYR6 380 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 MOSPD2Q8NHP6 518 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 ARHGDIGQ99819 225 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 RPS6KB2Q9UBS0 482 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 ZNF69Q9UC07 566 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 ACOD1A6NK06 481 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 LRRN3E7EW58 273 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 PRR23D1E9PI22 279 aaPredicted RBP9.4□□□□□ -0.9
PTPRA-203ENST00000356147 HOXD4P09016 255 aaPredicted RBP9.4□□□□□ -0.9
PTPRA-203ENST00000356147 PRR23D2P0DMB1 279 aaPredicted RBP9.4□□□□□ -0.9
PTPRA-203ENST00000356147 ZNF85Q03923 595 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 PUS10Q3MIT2 529 aaKnown RBP9.4□□□□□ -0.9
PTPRA-203ENST00000356147 OR5M10Q6IEU7 315 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 FAM198BQ6UWH4 519 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 STPG2Q8N412 459 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 OR11G2Q8NGC1 345 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 OR52I2Q8NH67 350 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 ELP4Q96EB1 424 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 CAMK1GQ96NX5 476 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 NKX3-1Q99801 234 aaPredicted RBP9.4□□□□□ -0.9
PTPRA-203ENST00000356147 TMEM168Q9H0V1 697 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 LRRN3Q9H3W5 708 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 ZC4H2Q9NQZ6 224 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 SIDT1Q9NXL6 827 aaKnown RBP9.4□□□□□ -0.9
PTPRA-203ENST00000356147 CACNA1IQ9P0X4 2223 aa9.4□□□□□ -0.9
PTPRA-203ENST00000356147 LRRK1Q38SD2 2015 aa9.4□□□□□ -0.91
PTPRA-203ENST00000356147 UNC119BA6NIH7 251 aa9.4□□□□□ -0.91
PTPRA-203ENST00000356147 FAM171A2A8MVW0 826 aa9.4□□□□□ -0.91
PTPRA-203ENST00000356147 PEX12O00623 359 aa9.4□□□□□ -0.91
PTPRA-203ENST00000356147 HIST1H1TP22492 207 aaPredicted RBP9.4□□□□□ -0.91
PTPRA-203ENST00000356147 RPS15P62841 145 aaKnown RBP9.4□□□□□ -0.91
PTPRA-203ENST00000356147 ZC3H14Q6PJT7 736 aaKnown RBP9.4□□□□□ -0.91
PTPRA-203ENST00000356147 ZNF836Q6ZNA1 936 aa9.4□□□□□ -0.91
PTPRA-203ENST00000356147 CMTM4Q8IZR5 234 aa9.4□□□□□ -0.91
PTPRA-203ENST00000356147 KCT2Q8NC54 265 aa9.4□□□□□ -0.91
PTPRA-203ENST00000356147 OR52L1Q8NGH7 329 aa9.4□□□□□ -0.91
PTPRA-203ENST00000356147 OR6M1Q8NGM8 313 aa9.4□□□□□ -0.91
PTPRA-203ENST00000356147 CD99L2Q8TCZ2 262 aa9.4□□□□□ -0.91
PTPRA-203ENST00000356147 SMPDL3BQ92485 455 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms