RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 PKP4Q99569 1192 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 TREM1Q9NP99 234 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 GPATCH2Q9NW75 528 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 MRPL42Q9Y6G3 142 aaKnown RBP14.65□□□□□ -0.06
RTN3-205ENST00000356000 KANTRA0A1W2PQU2 76 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 TMEM72A0PK05 275 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 CLDN9O95484 217 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 C6orf47O95873 294 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 EPB42P16452 691 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 GJA1P17302 382 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 CTGFP29279 349 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 FLT3LGP49771 235 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 PKIAP61925 76 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 CDK5Q00535 292 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 RBM39Q14498 530 aaKnown RBP14.65□□□□□ -0.06
RTN3-205ENST00000356000 COX20Q5RI15 118 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 OLFML2AQ68BL7 652 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 CRTC1Q6UUV9 634 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 MBOAT1Q6ZNC8 495 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 TMPRSS11FQ6ZWK6 438 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 ZNF546Q86UE3 836 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 TAC4Q86UU9 113 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 SYT12Q8IV01 421 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 PRR18Q8N4B5 295 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 POGLUT1Q8NBL1 392 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 ARL11Q969Q4 196 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 WWOXQ9NZC7 414 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 WASF3Q9UPY6 502 aa14.65□□□□□ -0.06
RTN3-205ENST00000356000 TRAV14DV4A0A0A6YYC5 116 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 E7EQ34 232 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 GOSR2O14653 212 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 BCAT2O15382 392 aaPredicted RBP14.64□□□□□ -0.07
RTN3-205ENST00000356000 BCL2L11O43521 198 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 VSIG10L2P0DP72 767 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 NR2C1P13056 603 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 ADRB3P13945 408 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 TYRP1P17643 537 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 AGTR1P30556 359 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 FOXO1Q12778 655 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 DHCR24Q15392 516 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 CSRP2Q16527 193 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 ZNF791Q3KP31 576 aaPredicted RBP14.64□□□□□ -0.07
RTN3-205ENST00000356000 DNLZQ5SXM8 178 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 ATPAF1Q5TC12 328 aaPredicted RBP14.64□□□□□ -0.07
RTN3-205ENST00000356000 TSSK4Q6SA08 328 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 ARMCX2Q7L311 632 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 TTC16Q8NEE8 873 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 OR4A4PQ8NGN8 299 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 OR1J4Q8NGS1 313 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 OR4Q3Q8NH05 313 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 HMGB4Q8WW32 186 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 RCC2Q9P258 522 aaKnown RBP14.64□□□□□ -0.07
RTN3-205ENST00000356000 OARD1Q9Y530 152 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 TDRD15B5MCY1 1934 aaKnown RBP14.64□□□□□ -0.07
RTN3-205ENST00000356000 NDUFB6O95139 128 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 F2P00734 622 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 USP17L7P0C7H9 530 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 EPXP11678 715 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 ARF4P18085 180 aaPredicted RBP14.64□□□□□ -0.07
RTN3-205ENST00000356000 CEACAM6P40199 344 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 FZD5Q13467 585 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 PLEKHN1Q494U1 663 aaPredicted RBP14.64□□□□□ -0.07
RTN3-205ENST00000356000 LIPJQ5W064 366 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 LINGO4Q6UY18 593 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 ESPNLQ6ZVH7 1005 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 SLC36A1Q7Z2H8 476 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 C6orf120Q7Z4R8 191 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 UBTD2Q8WUN7 234 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 EGFL8Q99944 293 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 EBPLQ9BY08 206 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 CHST5Q9GZS9 411 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 TMEM185BQ9H7F4 350 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 TMEM161AQ9NX61 479 aa14.64□□□□□ -0.07
RTN3-205ENST00000356000 VSX1Q9NZR4 365 aaPredicted RBP14.64□□□□□ -0.07
RTN3-205ENST00000356000 HOXB5P09067 269 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 SLC2A1P11166 492 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 PAX1P15863 534 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 HOXA5P20719 270 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 OPRD1P41143 372 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 BDH1Q02338 343 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 ZNF345Q14585 488 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 NPSR1Q6W5P4 371 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 LBX2Q6XYB7 198 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 PIANPQ8IYJ0 282 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 AVL9Q8NBF6 648 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 HJURPQ8NCD3 748 aaPredicted RBP14.63□□□□□ -0.07
RTN3-205ENST00000356000 XAGE5Q8WWM1 108 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 TAAR9Q96RI9 348 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 TMEM138Q9NPI0 162 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 FBXW2Q9UKT8 454 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 PSMD9O00233 223 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 MBTPS2O43462 519 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 IFNA2P01563 188 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 C1GALT1C1LP0DN25 315 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 CD79AP11912 226 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 RNH1P13489 461 aaKnown RBP14.63□□□□□ -0.07
RTN3-205ENST00000356000 CCND3P30281 292 aaPredicted RBP14.63□□□□□ -0.07
RTN3-205ENST00000356000 AVPR2P30518 371 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 F2RL1P55085 397 aa14.63□□□□□ -0.07
RTN3-205ENST00000356000 C21orf58P58505 322 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms